Gene Information

Name : rnhA (RSP_0867)
Accession : REF_jgi:RSP_0867
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 2617220 - 2617675 bp
Length : 456 bp
Strand : +
Note : IMG reference gene:2512955900; PFAM: RNase H; truncated by 24 aa

DNA sequence :
ATGCCAGACCTCTATGCCTATACCGACGGTGCCTGCAGCGGAAATCCCGGCCCGGGAGGCTGGGGCGTGCTGATGCTCGC
GCGCGAGGGCGAGGCGGTGGTCAAGGAGCGCACGCTGCAGGGCGGCGAGGTGCTCACCACCAACAACCGGATGGAACTGA
TGGCCGCCATCTCGGCGCTCGAGGCGCTGACGCGGCCGACCGAGATCACCATCGTGACCGACAGCGCCTATGTGAAGAAC
GGCGTGACGACCTGGATCCACGGCTGGAAGCGCAACGGCTGGAAGACCGCCGACAAGAAGCCGGTGAAGAACGCGGAACT
CTGGGAAAGGCTCGACGCGGCCCAGCAGCGGCACAAGGTCGTCTGGCGCTGGATCAAGGGACATTCCGGCCACGCCGAGA
ACGAGCGTGCCGACGAGCTGGCACGCGCGGGCATGGCCCCCTTCAAGACGCGCTAG

Protein sequence :
MPDLYAYTDGACSGNPGPGGWGVLMLAREGEAVVKERTLQGGEVLTTNNRMELMAAISALEALTRPTEITIVTDSAYVKN
GVTTWIHGWKRNGWKTADKKPVKNAELWERLDAAQQRHKVVWRWIKGHSGHAENERADELARAGMAPFKTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 9e-36 59