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Name : glcD (RSP_1020) Accession : REF_jgi:RSP_1020 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : putative glycolate oxidase subunit protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 2780190 - 2781623 bp Length : 1434 bp Strand : - Note : IMG reference gene:2512956058; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD DNA sequence : ATGCTCATGCCGCCACCGGACAAGGCTGTCCTGGCCCGCAAGGCCCGCATCGTCGAGCGGCTCCTGGCCGTGCTGCCGGC CGATGCCGTCATCCATGACGAGGCCGAGACCCGCGCCTACGAATGCGACGCGCTGACCGCCTATCGCTGCCCGCCGCTTG CGGCGGTGCTGCCGCGCTCCACGGCCGAAGTCTCCGCCGTCCTGCGGATCTGCCACGAGGAGCGGGTGCCGGTGGTGCCG CGCGGCTCGGGCACCTCGCTGGCCGGAGGCGCGCTGCCCACCGCGGATTGCGTGATTCTGGGCGTGGCCCGGATGAACCG GGTGCTCGAGACCGACTATGCCAACCGGTTCATCCGGGTCGAGACCGGGCGGACGAACCTCTCGGTGACGGGCGCGGTCG AGGTGGACGGCTTCTTCTATGCGCCCGATCCCTCGAGCCAGCTCGCCTGCGCCATCGCGGGCAATATCGCCATGAACTCG GGCGGGGCCCATTGCCTGAAATACGGTGTGACGACCAACAATCTGCTGGGCGTCACCATGGTGCTGATGGACGGGACCGT GGTCGAGATCGGCGGGGCGCATCTCGACGCGCCGGGCCTCGATCTTCTGGGCGTGATCTGCGGCTCGGAGGGGCAGCTCG GCGTCGTGACCGAGGCCACGCTGCGCATCCTGCCCAAGCCCGAGGGGGCGCGACCGGTGCTGATGGGCTTCGGCTCGAAC GAGGTGGCTGGCGCCTGCGTGTCGGACATCATCCGTGCGGGTATCCTGCCGGTGGCGATCGAATTCATGGACCGGCCCTG CATCCGGGCGACGGAGGCCTTCGCCAAGGCGGGCTATCCCGATTGCGAGGCGCTCCTCATCGTCGAGGTGGAGGGCTCGC CTGCCGAGATCGACGACCAGCTGGCCCGGATCCTCGAGATCGCGCGGCGGCACGATCCGGTCGAGCTGCGCGAGAGCCGC TCGGAGGAGGAGAGCCGGCGGATCTGGCTCGGGCGGAAATCGGCCTTCGGCGCGATGGGGCAGATCAACGACTACATGTG CCTCGACGGGACGATCCCGGTGACGGAGCTGCCGCGGGTGCTGCGGCGGATCGGCGAGTTGGCCGCCGAGGCGGGGCTCG AGGTGGCCAATGTCTTCCACGCGGGTGACGGCAACATGCATCCGCTGATCCTGTTCGATGCGAACCGGCCCGGCGATCTC GAACGCTGCGAGCGGCTCGGAGCCGAGATCCTGAAGCTCTGCGTCGAGGTGGGCGGCTGCCTGACCGGCGAGCATGGCGT GGGGGTGGAGAAGCGCGACCTGATGGGGGTGCAGTTCGCGCCCGCGGATCTCGAGGCGCAGATGCGGGTGAAGGATGTGT TCGATCCGCGCTGGCTGCTCAATCCGGCCAAGGTCTTTCCGTTGGATGCGAGCGGGGACCGGCGTGCCGGCTGA Protein sequence : MLMPPPDKAVLARKARIVERLLAVLPADAVIHDEAETRAYECDALTAYRCPPLAAVLPRSTAEVSAVLRICHEERVPVVP RGSGTSLAGGALPTADCVILGVARMNRVLETDYANRFIRVETGRTNLSVTGAVEVDGFFYAPDPSSQLACAIAGNIAMNS GGAHCLKYGVTTNNLLGVTMVLMDGTVVEIGGAHLDAPGLDLLGVICGSEGQLGVVTEATLRILPKPEGARPVLMGFGSN EVAGACVSDIIRAGILPVAIEFMDRPCIRATEAFAKAGYPDCEALLIVEVEGSPAEIDDQLARILEIARRHDPVELRESR SEEESRRIWLGRKSAFGAMGQINDYMCLDGTIPVTELPRVLRRIGELAAEAGLEVANVFHAGDGNMHPLILFDANRPGDL ERCERLGAEILKLCVEVGGCLTGEHGVGVEKRDLMGVQFAPADLEAQMRVKDVFDPRWLLNPAKVFPLDASGDRRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-97 | 49 |
