Name : RSP_3477 (RSP_3477) Accession : REF_jgi:RSP_3477 Strain : Genome accession: NC_007494 Putative virulence/resistance : Virulence Product : type VI secretion protein, VC_A0107 family Function : - COG functional category : S : Function unknown COG ID : COG3516 EC number : - Position : 547516 - 548046 bp Length : 531 bp Strand : + Note : IMG reference gene:2512956987; PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family DNA sequence : ATGAGCGAGAGCAAGGCGAAGGTGATCGAACGCAACCGCGCTCCGCGGGTGCAGATCGCCTATGACGTGGAGCATTACGG CAGCCCGACGACCATCGAGCTGCCCTTCGTGATGGGGGTCATGGCCGACCTCGCCGGCAAGTCCGAGACGCGCGAGGCGC AGAAACCCGCGGCCGAGCGGGCCTTCGTCGAGGTGGATGCCGGCCGGTTCGGCAAGTTCATGGAGGCGCTGAGCCCGCGG GTGAAGGCACGGGTCCCGAACCGGCTGCCCGGCGGGGCGGAGGGCGGCGAGGAGGAGATGTTCGTCGATCTCAGCTTCCG CAGCATGGGCGATTTCGCCCCCGACCGCATGGCCGAGCAGGTGCCGGCGCTGGCCGAGCTCCTGCGGATGCGGCGCCAGC TCGAAGAGCTTCTCGGCTACATGGACGGCAAGGTCAGTGCCGAGAAGCGCATCGCCCAGCTTCTGACGAACGAGCCGCTG CTCGCGCAGGTCGCGGGCGAGGCCGTGAAGTCGCGTCAGCCGGAGGAATGA Protein sequence : MSESKAKVIERNRAPRVQIAYDVEHYGSPTTIELPFVMGVMADLAGKSETREAQKPAAERAFVEVDAGRFGKFMEALSPR VKARVPNRLPGGAEGGEEEMFVDLSFRSMGDFAPDRMAEQVPALAELLRMRRQLEELLGYMDGKVSAEKRIAQLLTNEPL LAQVAGEAVKSRQPEE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0297 | NP_454879.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 5e-27 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
RSP_3477 | REF_jgi:RSP_3477 | type VI secretion protein, VC_A0107 family | VFG2069 | Protein | 2e-25 | 47 |