|
Name : CHY_0166 (CHY_0166) Accession : YP_359038.1 Strain : Carboxydothermus hydrogenoformans Z-2901 Genome accession: NC_007503 Putative virulence/resistance : Unknown Product : transketolase, C-terminal subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : - Position : 139840 - 140778 bp Length : 939 bp Strand : + Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780 DNA sequence : GTGGGAGGAATAGCCACAAGGGAAGCATACGGAAAGGCCCTGGTTGAATTGGGGCAGGAAAACCCGAAAATCGTTGTTTT AGATGCGGACTTATCTAAGTCCACGAAAACCTCCGATTTTGCCAAAGCTTTTCCCGAGAGATTTTTTAACATGGGCATTG CTGAGCAAAATTTAATGGGGGTTGCTGCCGGTCTTTCTACGGTGGGGAAAATACCCTTTGCCAGTACCTTTGCGGTGTTT GCGGCGGGCAGAGCGTTTGAAATAATTCGAAACAGTATCTGTTACCCGAAGCTCAATGTGAAAATTGCTGCTACCCATGC GGGTTTAACGGTGGGGGAAGACGGAGCTTCCCACCAGGCAATAGAAGATCTGGCTTTGATGCGGGTTTTACCCAATATGC AGGTATTTGTACCCGCCGATGCCGCCCAGACCCGTGCTATTGTAAAAAAAGCTGCGGAAATAGAGGGTCCGGTTTACATC CGTCTTGGCCGTTCCGGGGTGCCGGAGGTGTTTTCGCCAGATATTCGGTTTGAACCGGGGCGGGGTACGGTGCTTAAAGA AGGTAAAGATGTAACTATAGTTGCTCTCGGGATTATGACGGCCAAAGCGTTAGAGGCAGCTAAGATGTTAGAGGCAGAAG GCATCGCGGCAAGGGTTGTGGACATGGCAAGCCTTAAGCCCATAGACCGGGAGCTTTTGGTGGAAAGCGCTCGACTTACG GGAGCTGTGGTAACGGCGGAGGAACATTCGGTTATTGGCGGACTTGGCAGTGCGGTGGCGGAGGTTTTAAGCGAGGAGTA TCCGATACCGGTGGTAAAAGTAGGAGTTAATGATGTGTTTGGGGAGTCGGGAACTCCGCAAGCGCTTTTGGAAAAATACG GCTTAACCGCCAGGGACGTTGTAGCGGCGGTGCAAAAAGCGTTAACCTTAAAAAGGTAA Protein sequence : MGGIATREAYGKALVELGQENPKIVVLDADLSKSTKTSDFAKAFPERFFNMGIAEQNLMGVAAGLSTVGKIPFASTFAVF AAGRAFEIIRNSICYPKLNVKIAATHAGLTVGEDGASHQAIEDLALMRVLPNMQVFVPADAAQTRAIVKKAAEIEGPVYI RLGRSGVPEVFSPDIRFEPGRGTVLKEGKDVTIVALGIMTAKALEAAKMLEAEGIAARVVDMASLKPIDRELLVESARLT GAVVTAEEHSVIGGLGSAVAEVLSEEYPIPVVKVGVNDVFGESGTPQALLEKYGLTARDVVAAVQKALTLKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 2e-43 | 48 |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 3e-36 | 47 |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 7e-48 | 45 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 7e-48 | 45 |
