Gene Information

Name : CHY_0684 (CHY_0684)
Accession : YP_359539.1
Strain : Carboxydothermus hydrogenoformans Z-2901
Genome accession: NC_007503
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 598972 - 599325 bp
Length : 354 bp
Strand : +
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGAATAAAGCCCTTGGTCTAATTGAAGCAATTGGTTACTCTACCGCTATGACGGCTTTAGATGCTGCTGTAAAAGCTGC
CAACGTTACCTTTTTGGGCTTTGAACGGGTTATAGGGGCTGGAAAAAAAATTTCCGTTACCATAAAGCTTGAAGGGGAGG
TTGCGGCGGTAAAAGCTGCGGTTGATGCAGGTGTTGCGGCGGCTCAAAGAGTGGGCGAAGTTTTAACTTCGCATGTAATT
CCTCGACCCCATCAGGAGTTAGATAAAATCATTTTTAGCAGTGAAACCCAAGAATCGTTGTTAAAGCCTAAAAATCCTGC
GGAAAAAAATAAGGATAATAAAAAATCTAAGTAA

Protein sequence : 
MNKALGLIEAIGYSTAMTALDAAVKAANVTFLGFERVIGAGKKISVTIKLEGEVAAVKAAVDAGVAAAQRVGEVLTSHVI
PRPHQELDKIIFSSETQESLLKPKNPAEKNKDNKKSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-09 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-09 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHY_0684 YP_359539.1 microcompartments family protein VFG1596 Protein 8e-10 54
CHY_0684 YP_359539.1 microcompartments family protein VFG1597 Protein 1e-09 54
CHY_0684 YP_359539.1 microcompartments family protein VFG1598 Protein 5e-10 49