|
Name : rnhA (XCV1089) Accession : YP_362820.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 1224800 - 1225252 bp Length : 453 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAATTCATTGAAGTGCATACCGATGGCTCCTGCCTCGGCAACCCCGGCCCGGGCGGCTGGGCGGCCTTGCTGCGTTA CAACGGCCGCGAAAAGGAGCTGGCCGGCGGCGAGGCGGTATCGACGAACAACCGCATGGAATTGATGGCGGCGATCATGG CGCTGGAAACGCTGACCGAGCCGTGCCAGATCGTGTTGCATACCGATTCGCAGTACGTACGCCAGGGCATCACCGAATGG ATGCCGGGGTGGGTGCGACGCAACTGGAAGACCGCCGGTGGCGATCCGGTCAAAAATCGCGAGTTGTGGGAGCGGTTGCA CGCGGCCACGCAGCGCCATCGCATCGATTGGCGTTGGGTGAAAGGCCACAATGGCGACCCGGACAACGAGCGCGTCGACG TGCTCGCCCGCAATCAGGCCATCGCCCAGCGCGATGGTCTTGCGACATCGTAA Protein sequence : MKFIEVHTDGSCLGNPGPGGWAALLRYNGREKELAGGEAVSTNNRMELMAAIMALETLTEPCQIVLHTDSQYVRQGITEW MPGWVRRNWKTAGGDPVKNRELWERLHAATQRHRIDWRWVKGHNGDPDNERVDVLARNQAIAQRDGLATS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-39 | 60 |
