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Name : secD (XCV2693) Accession : YP_364424.1 Strain : Xanthomonas campestris 85-10 Genome accession: NC_007508 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3049133 - 3050977 bp Length : 1845 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTCGAATTTCCTCGCTGGAAGTACTTCCTGATCCTGCTGGTACTGGCCGTCAGCGCGCTGTATGCGTTGCCCAACGT GTACCAGAAGGACCCGTCCGTGCAGATCACCGCCAGCCGCGGTGCGCAGCTCGACGACGCATTGCGCAGCCGCATCGACG GTGAGCTCAAGAGCGCCGGCATCACCCAGAAGGCGATCACAAAAGAAGGCGACAGCCTGATGGTGCGGTTGCCTTCGCTG CAGGCGCAGACACGCGCCAACGACGTGTTGCGTCAGCAGCTGGGCGAGAACTACACCGTGGCGCTGAACCTGGCCTCCAC CGTGCCGGACTGGCTGGCCAAGCTGGGCGGCCGGCCGATGGTGCTGGGTCTGGACCTGGTGGGCGGCGTGCACTTCGCCA TGCAGGTCGACCAGAAGGCCGCGCTGGAAAAGCGCCTGGACGGGTTTGCCGAAGACATCCGCACCACCTTGCGCGATGCG CGTATCCCGTATCGCTCGGTGGAACGTCGCGCTGACAACAGTATCCAGGTCAACCTGGGCGAGGGCGCCAATGCCGACGC CGCGCGCGTGACGCTGGCCAAGGCGCAGCCGACCCTGACCTACGACGTCAGCGGCCAGAACATCGCCGTGAAGGTGCCGG AGGCCGAGCTCAAGCAGATCGCCAGCGGTGCGATCGAGCAGAACCTCACCACCTTGCGCAACCGCGTCAACGCACTGGGC GTGTCCGAGCCGACCATCCAGCGCCAGGGCGAGGACCGCATCGTGGTCGAACTGCCCGGTCTGCAGGACACCGCCGAAGC CAAGCGCCTGATCGGTGCCACCGCCTCGCTGGAATTCCGCGCCGTGGTCGACGGTAATGCCGACGATGCCGTGCGCAGCG GCAACATTCCGCCGGAGGCCAAGGTCTATCGCCTGCGCGACAGCAACGCGCCGGTGTTGTTGAACAAGCGCGCGCTGGTG ACCGGCGACCAGATGGTCAGCGCATCGGTCAGCACCGACCAGAACGGCATGCCGGCAGTGGCGGTGACGCTCAACAACGT CGCCGGCCAGCGCATGTTCGACTACACCAGCGCCAACGTCGGCAAGCTGATGTCGGTGGTCTACATCGAGCGCATTCCCA CCGTGACCATGGTCGACGGCAAGGAAGTGCGCAGCGTACGGGTCAAGGAAGAAGCCTTGTCGCCGACCCGCATTGCCGGC GTGTTCGGCAAGAACTTCCAGACCACCGGTCTGGAAAAGACCGAAGCCGAGAACCTGGCCAAGCTGCTGAAATCCGGCTC GCTGGCCGCACCGATGGATTTCGTCGAGGAATACGTGATCGGCCCGAGCCTGGGTGCGGAGAACGTGGAGCGCGGCGTCA CGGCGGTGGTCTACTCGTTCCTGTTTACGCTGGTGTTCTTCACCATCTACTACCGCGTGTTCGGCGCGATCACCTCGGTG GCGCTGCTGTTCAACCTGCTGATCGTAGTGGCGGTGATGTCGCTGTTCGGTGCCACCATGACATTGCCGGGCTTTGCTGG CCTGGCGCTATCGGTCGGTCTGTCGGTGGACGCCAACGTGCTGATCAACGAGCGTATCCGCGAAGAGTTGCGCCTGGGCG TACCGGCCAAGTCGGCGATTGCGGCCGGTTACGAAAAGGCCGGTGGCACCATCCTCGATGCCAACCTCACTGGGCTGATC GTGGCAGTGGCCCTGTATGCGTTCGGTACCGGCCCGCTGAAGGGCTTCGCGCTGACCATGATGATCGGTATTTTCGCCTC GATGTTCACCGCGATCACGGTCTCGCGTGCGCTGGCGGTGTTGATCTACGGCAGCCGCAAGAAGCTGAAGTCTGTCGCTA TTTAA Protein sequence : MLEFPRWKYFLILLVLAVSALYALPNVYQKDPSVQITASRGAQLDDALRSRIDGELKSAGITQKAITKEGDSLMVRLPSL QAQTRANDVLRQQLGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFAMQVDQKAALEKRLDGFAEDIRTTLRDA RIPYRSVERRADNSIQVNLGEGANADAARVTLAKAQPTLTYDVSGQNIAVKVPEAELKQIASGAIEQNLTTLRNRVNALG VSEPTIQRQGEDRIVVELPGLQDTAEAKRLIGATASLEFRAVVDGNADDAVRSGNIPPEAKVYRLRDSNAPVLLNKRALV TGDQMVSASVSTDQNGMPAVAVTLNNVAGQRMFDYTSANVGKLMSVVYIERIPTVTMVDGKEVRSVRVKEEALSPTRIAG VFGKNFQTTGLEKTEAENLAKLLKSGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVYSFLFTLVFFTIYYRVFGAITSV ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRLGVPAKSAIAAGYEKAGGTILDANLTGLI VAVALYAFGTGPLKGFALTMMIGIFASMFTAITVSRALAVLIYGSRKKLKSVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-108 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-108 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-108 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-108 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-107 | 45 |
