Gene Information

Name : Syncc9605_0660 (Syncc9605_0660)
Accession : YP_380989.1
Strain : Synechococcus sp. CC9605
Genome accession: NC_007516
Putative virulence/resistance : Unknown
Product : glycolate oxidase subunit GlcD
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 632617 - 634068 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
GTGGCCCACGACTGGTCAGTGCTGGAGAGGGATCTGCGGCGATGTCTGCCGGCTCGGGCCATCGTGGCGAAGCGTCAGGA
ACTGCTCAGTTACGACTGTGACGGACTGACACTTGAGCGCCACTGTCCGCCCCTGGCGGTGCTGCCGGAGACCACCGAAC
AGGTGGCTGCGGTGTTGCAGTGCTGCCATCAACACGGTGTGCCGTTTGTGGCCCGTGGAAGCGGTACCGGCCTCTCAGGG
GGAGCGTTGGTGGATCAGCAGGCGCTGCTGGTGGTGACCAGTCGCATGCGTCAGGTGCTCGGCCTCGATCTGGCCAATCA
GCGGGTCACGGTGCAGCCCGGGGTGATCAACAGTTGGGTGACGCGTGCTGTTGCAGGCGACGGGTTTTATTACGCCCCGG
ATCCGTCCAGCCAGGTGGTGTGCAGCATCGGCGGCAATGTGGCGGAAAACTCGGGCGGGGTGCACTGCCTCAAATACGGC
GTGACCAGCAACCATGTGCTGGGGCTTGAGGTGGTGCTGCCCGATGGAACCATCACGCAGTTGGGCAATGGGCTGGCTGA
ATCGTGCGAACTGGATCTACGTGGTGCATTCATCGGCAGCGAAGGAACTCTGGGCATCGCGACGGCCATCACCCTGCGCC
TGCTTCGGGCTCCGGAGTGCGTGACCGTGCTGTTGGCGGATTTCGCCACGATGGAAGCAGCAGGGGAGGCGGTGAGATCG
GTGACCGCGAGCGGCCTCTTGCCGGCGGGGATGGAAATCATGGACAACGTCACCATCAACGCCGTCAATGATTTCTTCGG
GTACGACGAGTACCCGCGTGATGCTGCGGCCGTTCTGCTGATTGAGCTCGATGGCCAGGAGGCTGAGGTGCAGGCCTCAT
CAGAACGGGCTGAAGCGCTTTGTCGTGCGGCAGGGGCCCGTGGTCTGCGTCGGGCCCAAGACCCCACGGAGTGTGCGGTG
CTCTGGAAAGGCCGCAAATCTGCGTTTTCAGCCGTGGGAAAAATCACACCGACCTATTACGTGCAAGACGGTGTCGTTCC
CCGCAGCAGCCTTCCGTCGGTGCTTGCGGCGATTGAACGGCTCAGCCAGGAACACGGCCTGCCCGTGGCCAATGTTTTCC
ATGCCGGAGATGGCAACCTTCATCCATTGATCCTGTATTCACTGAATCAGCCCGATGTAGAGCGGAGCGTGAAGGAGCTC
GGTGCCGCCATCCTGCGGGTGTGTCTTGATGCCGGTGGCAGCATCAGCGGAGAGCACGGCGTCGGCGCCGACAAGCGTTG
CTATCTCGACTGGATGTTCACTCCCGATGACCTGGAAACGATGGGGCTGTTGCGGTCTGCCTTTGATCCGGACAACCGCG
CCAATCCGGGCAAGGTGTTGCCCACGCCGCGAACCTGCGGGGAATCGGCCAAACGGATGGTGACGCTGCCCGCTGGCGTG
GAGGTTTACTGA

Protein sequence :
MAHDWSVLERDLRRCLPARAIVAKRQELLSYDCDGLTLERHCPPLAVLPETTEQVAAVLQCCHQHGVPFVARGSGTGLSG
GALVDQQALLVVTSRMRQVLGLDLANQRVTVQPGVINSWVTRAVAGDGFYYAPDPSSQVVCSIGGNVAENSGGVHCLKYG
VTSNHVLGLEVVLPDGTITQLGNGLAESCELDLRGAFIGSEGTLGIATAITLRLLRAPECVTVLLADFATMEAAGEAVRS
VTASGLLPAGMEIMDNVTINAVNDFFGYDEYPRDAAAVLLIELDGQEAEVQASSERAEALCRAAGARGLRRAQDPTECAV
LWKGRKSAFSAVGKITPTYYVQDGVVPRSSLPSVLAAIERLSQEHGLPVANVFHAGDGNLHPLILYSLNQPDVERSVKEL
GAAILRVCLDAGGSISGEHGVGADKRCYLDWMFTPDDLETMGLLRSAFDPDNRANPGKVLPTPRTCGESAKRMVTLPAGV
EVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 1e-97 49