|
Name : clpB (Gmet_2851) Accession : YP_006721806.1 Strain : Geobacter metallireducens GS-15 Genome accession: NC_007517 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3228780 - 3231374 bp Length : 2595 bp Strand : - Note : - DNA sequence : ATGATTCGACCCGAAAAAATGACCATAAAGACCCAGGAGGCCCTGGCCGGCGCCCAGCAGCTCGCCGCGCGGCAGGGAAA CGGCACCATCGAACCGGAACATCTCCTCGCAGCGCTCCTCGAGCAGGAAGGGGGGCTTGTGGCCCCGATCCTCCAGAAGG TGGGAGCCGCGCCTGCCTCCCTGCGGAGCTCCGTTGACGCGCTCCTTAAAAAGCTCCCCCAGGTGAGCGGCGCCACGGCC CAGGCCTACCTCTCGCCCTCTCTGAACCGGATTCTCGACGGGGCCCAGCGGGAAGCCGATGCCATGAAGGACGAGTTCGT CTCCACCGAGCACCTTCTCCTCGGCTTCTTCGCCGACAAACAGTGCGCGGCAACTCGGGCGCTTCTCGATGGCGGCGCCA CCCGCGAGAACGTGCTGGCGGCGCTCGTGGAGATCCGCGGCGGCGAGCGGGTCACCGATCAGAGCCCCGAGGACAAGTAC CAGGCTCTGACCAAGTACGCCCGGGACCTGACCGACCTGGCCCGCCAGGGGAAGCTTGACCCGGTTATCGGCCGGGATGA TGAAATCCGGCGGGTGCTGCAGGTCCTGTCCCGGCGCACCAAGAACAACCCGGTCCTCATCGGTGAGCCGGGGGTGGGGA AGACCGCCATCGTGGAGGGGCTCGCCCAGCGGATTGTCTCGGGGGACGTGCCGGAATCCCTGAAGGATAAGCGCCTCGTG GCCCTCGACATGGGGGCCCTCATCGCCGGCGCCAAGTATCGGGGGGAGTTCGAGGAGCGGCTCAAGGCGGTTATCAAGGA GGTGGCCAAGTCCGAGGGAAAGGTGATCCTCTTCATTGACGAGCTCCACACCCTGGTGGGGGCCGGAGCCGCCGAGGGGG CCATGGACGCCTCCAACATGCTCAAGCCGGCCTTGGCCCGGGGGGAGCTCCACTGCATCGGCGCCACCACCCTCAACGAG TACCGCAAGTACATCGAGAAGGACGCGGCCCTGGAGCGGCGCTTCCAGCAGGTCTACACCGGCGAGCCGAGCGTGGAGGA CACCATTGCCATCCTCCGGGGGCTCAAGGAGAAGTACGAGACCTACCACGGCATCCGGATCAAGGACAGCGCCATCATCG CCGCCGCCACGCTTTCGGACCGCTACATCACCGACCGCTTCCTCCCCGACAAGGCCATCGACCTCATCGACGAGGCCGCC TCGCGCCTGAGGATCGAGATTGACTCCATGCCAACCGAGATCGACGAGGTGGAGCGGAAGATCATCCAACTGGAGATCGA GAAGCAGGCGCTTTTGCGGGAGCAGGACCCCCACGCCCTGGAGCGTCTCCAGAAGCTGACTGACGAGCTGAACGGGCTCC AGGCCCAAGCGGCGGAGCTGAAGGCCCACTGGCGGCAGGAGAAGGAAATTATCAAGGGACTCAGCGAACTGAAGCAGCAG CTTGAGGAGAGGAAAGAGCAGGCGAAGAAGGCCGAGCGGGAGGGGAACCTGGCCCGTACCGCGGAGATCCGCTATGGAGA GATTCCTGCCATCGAGAAGGAAATGGAGGAGAAGAAGCAGCAACTGGAGGCGCTCCAGAAGGAAGGGAAGATGCTCCCCG AAGAGGTTGATGGCGAACTGGTGGCTGAAATCGTCTCCCGCTGGACTGGTGTTCCGGTCTCACGCATGATGGAGGGGGAG GCGGACAAGCTCGTGCACATGGAGGAGCGGCTCAAGACCCGCGTGGTGGGCCAGAACGACGCCCTGCTGCTGGTGGCCAA CGCCATCCGCCGCGCCCGGTCGGGGCTCTCGGACCCCAACCGCCCCATCGGCTCCTTCCTCTTCCTGGGCCCCACCGGGG TCGGGAAGACCGAAACCGCCAAGGCCCTGGCCGAGTTCCTCTTCAACGACGACCAGGCCATTGTCCGGATCGACATGAGC GAGTACCAGGAAAAACACACCGTGGCCCGGCTCATCGGTGCGCCCCCCGGCTACGTCGGCTACGAGGAGGGGGGGCAGCT CACGGAAGCGGTCAAGCGCCGCCCCTACTCCATCGTCCTTTTCGACGAAATCGAGAAGGCCCATGCCGAGGTGTTCAACG TCCTCCTCCAGGTGCTCGATGACGGCCGGCTCACCGACGGCCAGGGGCGGACAGTGGATTTCCGCAATACGGTCATCATC ATGACGAGCAACCTGGGCTCCCAGTGGATCCAGCAGTATGGCGCCAGCGACTACACCCGCATGAAGCAGATGGTGACCGA GACCCTGCGGGAGAGCTTCAAACCCGAGTTCCTGAACCGGATCGACGAGGTGGTCATCTACCACGCGCTGCCGCTCGAGC GGATCAAGCAGATCATCGACATCCAGATCCAAGGGCTGAAGAAGCGCCTCGCCGAGCGGCACATCACCCTGGAGATCACC GACAAGGCACGGGAATACCTGGCCCAGGAGGGGTACGATCCAGCCTACGGAGCACGGCCCCTCAAGCGGGCGATCCAGCG CAAGGTTCAGGACCCCCTGGCCCTCATGCTCCTCGAAGGGAAGTTCCGGGAGGGGGACACCATCCGGGCCGACCTCTCCC ATGGCGGAGAAGGGCTCGTCATTACGAAAAAATAA Protein sequence : MIRPEKMTIKTQEALAGAQQLAARQGNGTIEPEHLLAALLEQEGGLVAPILQKVGAAPASLRSSVDALLKKLPQVSGATA QAYLSPSLNRILDGAQREADAMKDEFVSTEHLLLGFFADKQCAATRALLDGGATRENVLAALVEIRGGERVTDQSPEDKY QALTKYARDLTDLARQGKLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLKDKRLV ALDMGALIAGAKYRGEFEERLKAVIKEVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGATTLNE YRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYETYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAA SRLRIEIDSMPTEIDEVERKIIQLEIEKQALLREQDPHALERLQKLTDELNGLQAQAAELKAHWRQEKEIIKGLSELKQQ LEERKEQAKKAEREGNLARTAEIRYGEIPAIEKEMEEKKQQLEALQKEGKMLPEEVDGELVAEIVSRWTGVPVSRMMEGE ADKLVHMEERLKTRVVGQNDALLLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMS EYQEKHTVARLIGAPPGYVGYEEGGQLTEAVKRRPYSIVLFDEIEKAHAEVFNVLLQVLDDGRLTDGQGRTVDFRNTVII MTSNLGSQWIQQYGASDYTRMKQMVTETLRESFKPEFLNRIDEVVIYHALPLERIKQIIDIQIQGLKKRLAERHITLEIT DKAREYLAQEGYDPAYGARPLKRAIQRKVQDPLALMLLEGKFREGDTIRADLSHGGEGLVITKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006721806.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 9e-119 | 45 |
| clpB | YP_006721806.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 6e-110 | 42 |
