Gene Information

Name : Dde_1174 (Dde_1174)
Accession : YP_387670.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 1200789 - 1202975 bp
Length : 2187 bp
Strand : +
Note : TIGRFAM: Malate synthase G; KEGG: aeh:Mlg_1646 malate synthase G; PFAM: Malate synthase-like, core

DNA sequence :
ATGACAACAAGAACACAGACCGGCGGTCTGCAGGTGGCATCGTGCCTTTCCTGCCTTGTCGCCAATGAGATAGCGCCGGA
TACGGGTGTCGACCCTGTGGATTTCTGGGCGGGCGCCGAAGCATTGTTCAGGGATTTTGCGCCGCGTAACAAAGAGCTGC
TGGAACTGCGCGAAAGCATGCAGCAGTCCGTTGACGCGTGGCACCGCGAACGTGCCGGCAAGCCCCACGATGCGGCGGAA
TACAAGGCGTTTCTGGAAAAAACAGGCTATCTGCTGCCTGAAGGGGAGGATTTTACCATTTCTCCTGAGAATGTGGACCC
GGAAATAGCCGAGGTTGCCGGACCGCAGCTGGTAGTGCCCATTACCAACGCCCGTTATGCCGTCAATGCGGCCAATGCCC
GTTGGGGCAGCCTGTATGACGCTCTGTACGGCACCGACGTGATCGCTGAAACGGACGGCATGGAAAAAGGGCCGGACTAC
AATCCGGTGCGGGGCCGCGAGGTAATGCGTCTTGCAACGGCGTTTCTGGACAAAGCAGTGCCGCTGGACGGAATGTCGCA
TGGTGATGTGACTGCGTATATCCTGCTTCGGGACGGCCGGCGCCGTGTGCTGGCGGCCCGCGACGCATCGGGGAAAGAGA
CGGGACTCGCCGCGCCGGAGCAGTTTGTCGGTTTTTCCGGCGGTGATGCGCCTGCCGTGGTTGTTCTGCGCAATAACGGC
CTGCATATTGAGCTGCATGTGGACAGAACGCATCCCGTGGGGGCGGCGCATCCTGCCGGTGTGAAAGATGTGGTCCTTGA
AGCGGCAGTGACTACCATTCAGGACTGCGAAGATTCTGTAAGCGCCGTGGATGCCCACGACAAGACCAGAACGTACCAGT
CATGGCTGGGGCTGATCAAAGGCGATCTGGAAGCCAGCTTTGTGAAGGACGGAACACTGCGCGTGCGCACGCTCAATCCG
GACAGGGAATATACGGCGCCTGACGGCAGCGCTCTTGTGCTGCCCGGCCGCAGCCTGATGCTTATCCGCAACGTGGGGCA
TCTTATGACCACGGATGCCGTGCTGACGGAGGACGGCAGCCCCGTACCGGAGGGGATTCTGGACGCTCTGATGACAGGCT
ATGTGGCGCTGCACGAACTGAAGGGCAACGTACGCTACCGCAACAGCCGCACAGGCAGTGTGTATATCGTCAAGCCCAAG
ATGCACGGTCCGGAGGAAGTCCGCTTCACCTGCGATCTTTTCAGCAGGGTGGAGGATATTCTGGGACTGCCCCGTCATAT
GCTCAAGGTGGGGATTATGGATGAAGAGCGCCGCACGTCGCTGAATCTTAAAGAGTGCATCCGCGCGGCCCGCGAACGGG
TTATTTTTATCAATACCGGCTTTCTGGATCGTACCGGCGACGAGATTCATACCTGCATGGAGGCGGGGCCGGTTGTCAGA
AAGAATGATATGAAGGCGGAGCGCTGGATAGCTGCATACGAGGACTGGAACGTGGATGTGGGGCTGGCCTGCGGTTTTTC
GGGCAGGGCGCAGATAGGCAAGGGCATGTGGCCCAAGCCCGACAGCATGCGCGAAATGCTGGAAACCAAAGGGGCGCATC
CCCGCGCGGGTGCAGGTTGCGCATGGGTGCCCTCGCCTGCTGCAGCCACGCTGCATGCCATGCATTATCATGATGTGAAC
GTGCGCGATGTCCAGACAGCGCTGGCCGCCCGACGGCGCGCCTGCCGTGATGACATGCTGGTGCTGCCGCTGCTGCGTTC
GGCACCTGATGCAGGTGCTGTGCGTGAAGAACTGGAAAATAACATCCAGAGCATACTCGGATACGTGGTGCGCTGGATCG
AGCAGGGAATCGGTTGTTCCAAGGTGCCTGATATTCACAATGTGGGGCTGATGGAAGACCGTGCCACACTGCGTATTTCC
AGTCAGCATATCGCCAACTGGCTGCATCACGGCGTATGCACGCGGGAAGAAGTTATGGCCGTGTTTAAAAAAATGGCCGC
AGTGGTGGATTCGCAGAATGCCGGACATCAGGCGTACACGCCCATGGCGCCTGATTTTGAACGCAGCATCGCCTTTCAGG
CGGCGTGTGATCTGGTTTTCAAGGGGCGCGAGCAGCCCAGCGGCTATACCGAGCCGGTGCTGCACCAGCGCAGGCGCGAA
GCAAAAACGCGTTTCGGGCAGGTGTAA

Protein sequence :
MTTRTQTGGLQVASCLSCLVANEIAPDTGVDPVDFWAGAEALFRDFAPRNKELLELRESMQQSVDAWHRERAGKPHDAAE
YKAFLEKTGYLLPEGEDFTISPENVDPEIAEVAGPQLVVPITNARYAVNAANARWGSLYDALYGTDVIAETDGMEKGPDY
NPVRGREVMRLATAFLDKAVPLDGMSHGDVTAYILLRDGRRRVLAARDASGKETGLAAPEQFVGFSGGDAPAVVVLRNNG
LHIELHVDRTHPVGAAHPAGVKDVVLEAAVTTIQDCEDSVSAVDAHDKTRTYQSWLGLIKGDLEASFVKDGTLRVRTLNP
DREYTAPDGSALVLPGRSLMLIRNVGHLMTTDAVLTEDGSPVPEGILDALMTGYVALHELKGNVRYRNSRTGSVYIVKPK
MHGPEEVRFTCDLFSRVEDILGLPRHMLKVGIMDEERRTSLNLKECIRAARERVIFINTGFLDRTGDEIHTCMEAGPVVR
KNDMKAERWIAAYEDWNVDVGLACGFSGRAQIGKGMWPKPDSMREMLETKGAHPRAGAGCAWVPSPAAATLHAMHYHDVN
VRDVQTALAARRRACRDDMLVLPLLRSAPDAGAVREELENNIQSILGYVVRWIEQGIGCSKVPDIHNVGLMEDRATLRIS
SQHIANWLHHGVCTREEVMAVFKKMAAVVDSQNAGHQAYTPMAPDFERSIAFQAACDLVFKGREQPSGYTEPVLHQRRRE
AKTRFGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 1e-180 55