Gene Information

Name : Dde_3270 (Dde_3270)
Accession : YP_389759.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3264323 - 3264601 bp
Length : 279 bp
Strand : -
Note : KEGG: cts:Ctha_1877 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria

DNA sequence : 
ATGATGAATGCTCTTGGTATGATAGAGACCAAAGGTCTGGTTGGCGCAGTGGAAGCTGCCGATGCCATGGTAAAGGCTGC
CAATGTTGAACTGATCGGCCGCGAACAGGTGGGCGGCGGTCTGGTGACCGTGATGGTGCGCGGAGACGTGGGTGCCGTAA
AGGCCGCCACCGACGCCGGTGCAGCAGCCGCAGGCCGCGTGGGCGAACTGGTCAGCGTGCACGTTATTCCCCGCCCGCAC
AGCGAAGTGGAACTGATTCTGCCCAAGCGTTCCAAATAG

Protein sequence : 
MMNALGMIETKGLVGAVEAADAMVKAANVELIGREQVGGGLVTVMVRGDVGAVKAATDAGAAAAGRVGELVSVHVIPRPH
SEVELILPKRSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-08 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-07 65
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_3270 YP_389759.1 microcompartments protein VFG1596 Protein 3e-08 65
Dde_3270 YP_389759.1 microcompartments protein VFG1597 Protein 3e-07 65
Dde_3270 YP_389759.1 microcompartments protein VFG1598 Protein 1e-07 60