Gene Information

Name : Dde_3278 (Dde_3278)
Accession : YP_389767.1
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3268223 - 3268507 bp
Length : 285 bp
Strand : -
Note : KEGG: dsa:Desal_0472 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria

DNA sequence : 
ATGTCCTCTTCCAACGCACTCGGTATGATTGAAACCAGAGGTCTTGTGGGCGCAGTAGAAGCAGCTGACGCCATGGTGAA
GGCCGCAAACGTCACCCTGATCGGCCGTTCGCAGGTGGGCGGTGGTCTGGTGACCGTGATGGTCCGCGGCGACGTGGGCG
CAGTGAAGGCTGCAACCGACGCAGGCGCAGCCGCCGCCAACAATGTGGGCGAGCTGGTAAGCGTGCACGTGATTCCCCGT
CCCCACAGCGAAGTGGAAATGATTCTTCCCAAGGTGGAAGGCTAA

Protein sequence : 
MSSSNALGMIETRGLVGAVEAADAMVKAANVTLIGRSQVGGGLVTVMVRGDVGAVKAATDAGAAAANNVGELVSVHVIPR
PHSEVEMILPKVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-06 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-06 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-06 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_3278 YP_389767.1 microcompartments protein VFG1596 Protein 4e-07 61
Dde_3278 YP_389767.1 microcompartments protein VFG1597 Protein 1e-06 60
Dde_3278 YP_389767.1 microcompartments protein VFG1598 Protein 6e-07 57