Gene Information

Name : Dde_3281 (Dde_3281)
Accession : YP_389770.2
Strain : Desulfovibrio alaskensis G20
Genome accession: NC_007519
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activating family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : -
Position : 3270700 - 3271632 bp
Length : 933 bp
Strand : -
Note : TIGRFAM: Glycyl radical enzyme-activating; KEGG: dsa:Desal_0469 glycyl-radical enzyme activating protein family; PFAM: Radical SAM; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup

DNA sequence : 
GTGATTGAAAGAAAAGCACTGATTTTCAACATACAGAAATACAACATGTATGACGGTCCGGGCGTGCGGACTCTGGTGTT
CTTCAAGGGGTGTCCCTTGCGCTGCAAGTGGTGCTCAAATCCCGAAGGGCAACTCCGGCAGTATCAGGTTCTGTACAAGG
AGAACCTGTGTGTGCACTGCGGAGCCTGTGTGCCTGTGTGCCCTGCCGGCGTGCACACTATCTCTGCCTCCACATTGCGC
CACGGGTTTGCGGAAGGAGCACAGTGCATCGGCTGCCGCCGGTGCGAAGATGTCTGTCCTTCCTCTGCGCTTGCCGTGGT
GGGCGAGCAGAAAACCATATCGGAACTTCTGGAAGTCATCGAAGAGGACAGGCCTTTTTATGAAACCTCCGGCGGCGGGG
TGACGCTGGGCGGCGGCGAAGTGCTCATGCAGCCCGAGGCGGCCGTGAACCTGCTGGCAGCCTGCAAGCAGCACGGCATC
AACACCGCCATCGAAACCTGCGGCTATGCCAAACAGGAAGTGGTCATGAAGGCTGCCCAGTATGTCGATCTCTTTCTGTA
CGACGTCAAACATATCGATTCCGCAAGGCATTACGAACTGACCGGCGTGCGCAACGAGCTGATTCTGAGCAACCTTACCT
GGCTGCTGGAAAACAAGCACAATGTGAAAATACGGGTGCCGCTGCTGCGCGGGGTCAACGACAGTGAAGACGATCTGCGC
GGACTGGTCGAGTACCTCAGACCGTATCAGGATTACAAAAATTTCAAAGGCATAGACTTGCTGCCCTACCACAAGATGGG
TGTGGGCAAGTACAAGCAGCTGGGCTGGGAATACCCCATTGAGGGCAACCCCGCACTGAGCGATGCCGACCTTGAACGTG
TCGAGGCCTGCATCCGCAAATATGACTTTCCGGTTTCGGTGATCCGCCACTGA

Protein sequence : 
MIERKALIFNIQKYNMYDGPGVRTLVFFKGCPLRCKWCSNPEGQLRQYQVLYKENLCVHCGACVPVCPAGVHTISASTLR
HGFAEGAQCIGCRRCEDVCPSSALAVVGEQKTISELLEVIEEDRPFYETSGGGVTLGGGEVLMQPEAAVNLLAACKQHGI
NTAIETCGYAKQEVVMKAAQYVDLFLYDVKHIDSARHYELTGVRNELILSNLTWLLENKHNVKIRVPLLRGVNDSEDDLR
GLVEYLRPYQDYKNFKGIDLLPYHKMGVGKYKQLGWEYPIEGNPALSDADLERVEACIRKYDFPVSVIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 2e-64 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dde_3281 YP_389770.2 glycyl-radical enzyme activating family protein VFG1591 Protein 1e-64 46