Gene Information

Name : Tcr_0846 (Tcr_0846)
Accession : YP_391116.1
Strain : Thiomicrospira crunogena XCL-2
Genome accession: NC_007520
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 923593 - 923901 bp
Length : 309 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTACAGAATACGGAATTGCTTTAGGTATGATCGAAACACGCGGTTTGGTTCCAGCGATTGAAGCTGCGGATGCAAT
GACTAAAGCAGCAGAAGTTCGCTTAGTTAGCCGTGAATTTGTTGGTGGCGGATACGTTACTGTTTTGGTTCGCGGTGAAA
CAGGTGCGGTAAACGCAGCGGTTCGTGCTGGTGCAGACGCTTGTGAACGTGTAGGTGACGGTCTTGTTGCAGCGCACATC
ATTGCTCGCCCACACAAAGAAGTTGAGCCAGTTTTGGCGCTTGGTAACAGTTCACCTGATCGTAGCTAA

Protein sequence : 
MSTEYGIALGMIETRGLVPAIEAADAMTKAAEVRLVSREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHKEVEPVLALGNSSPDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tcr_0846 YP_391116.1 microcompartments protein VFG1596 Protein 1e-11 56
Tcr_0846 YP_391116.1 microcompartments protein VFG1597 Protein 8e-12 52
Tcr_0846 YP_391116.1 microcompartments protein VFG1598 Protein 6e-11 48