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Name : iroC (SDY_1025) Accession : YP_402681.1 Strain : Shigella dysenteriae Sd197 Genome accession: NC_007606 Putative virulence/resistance : Virulence Product : ABC transporter protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 968581 - 972240 bp Length : 3660 bp Strand : - Note : Code: V; COG: COG1132 DNA sequence : ATGCCTGCGAATCACACTCCCACACCGGCTAATTCATGGATAGTTCGCCTGGCGCGCGTGTGCTGGGAACGTAAGAAACT TAGTGTCATCGTGGTGGTAGCGTCAGTATCGACTATTTTGCTGGCTGCGCTGACACCACTGCTGACAAGACAGGCTGTGA ATGACGCACTGGCGGGCAATCCGGCCCGCCTGCCGTGGCTGGCCTGCGGGTTACTGTTGATCGCTTTGGTTGATTTCATC GGTAACTATGTGCGCCGTGGTTATGCCGGGATGCTCTCACTCTGGGTGCAGCATACCCTCAGAGGACGGGTATTCGACAG TATTCAAAAACTTGACGGCGCAGGCCAGGATGCGCTGCGCACCGGGCAGGTGATTTCACGGACCAACAGCGATCTGCAGC AGGTGCATACCCTGCTGCAGATGTGCCCGGTGCCGCTGGCAGTGTTCACTTATTACATTGCCGGCATTGCCGTGATGCTG TGGATGTCCCCTGCCATGACGCTTATCGTCGTGTGCGTACTGGTATGCCTGGCGATCACCGCGCTTCGTGCGCGTCGTAG GGTCTTCGCGCAAACCGGGCTGGCCTCGGACCAACTGGCGAATCTCACCGAACATATACGCGAGGTGCTGGCACAGATCT CAGTGGTAAAATCCTGTGTGGCAGAGATGCGTGAAACGCACTGGCTCGATAGGCAGTCGCGGCAGATTGTGCGTGTACGC ATCGGTGCGGTTATCTCGCAGGCGATGCCTGGGGCCACCATGCTGGCGCTACCGGTGCTCGGGCAAATCGTCCTGCTGTG CTACGGCGGGTGGTCGGTCATGCACGGGCGGATCGATCTCGGTACCTTCGTTGCATTCGCCAGCTTCCTCGCGATGCTGA CCGGGCCAACCCGCGTACTGGCATCGTTTCTGGTTATCGCACAGCGCACTCAGGCGTCCGTGGAGCGGGTGTTTGCACTG ATCGACACCCGTTCACAGATGGAGGACGGGACGGAGTCGATTAACAGTCAGGTTGTCGGACTGGAACTGGAGAATATGAG CTTTGACTACCACCATGGCGACAGACATATCCTCAGCGATATCTCCTTTTCCCTGCGCGCCGGTGAAACCGTGGCGGTGG TGGGCGCATCGGGTTCAGGAAAATCGACCCTGTTGATGCTGCTGGCGCGTTTTTATGATCCCTGCTCCGGAAAGATATGG CTCAACACCAGCGAAGGCCGACAAAATCTTCGCGATATCAGACTGGAGGCGCTTCGTCGCAGGGTAGGCATCGTATTTGA AGATGCTTTTCTGTTTGCCGGTACGGTGGCGGAAAATATCGCCTATGGCCACCCTCAGGCAACGGCGGACGACATTCGCC GTGCGGCAGCTGCAGCAGGAGCCAGCGATTTTATCAACGCCCTGCCGAAAGGCTTCGATAGCCTGTTAACCGAACGGGGT ACGAATCTTTCCGGCGGGCAGAGGCAGCGAATAGCACTGGCGCGGGCGCTCATTACTGCACCGGACGTGTTAATCCTGGA TGATACCACCTCAGCGGTTGATGCTGTTACGGAAGCGGAGATTAATACCGCGCTGGGTCGCTATGCTGACGAAGGGCATA TGCTGCTGGTGATTGCCCGACGGCGTTCAACGCTTCAGCTAGCCAGCCGGGTTGTGGTGCTGGATAAGGGCCGTATGGTG GATACCGGAACCCCGGCAGAACTTGAAGCGCGCTGTCCGGCGTTCCGCGCACTGATGACCGGCGACAGCGATTTTCTGGC CACGTCCCACAATAGCCACAACGAATTGTGGCCGGCTGAACCAGCGACACAAGACGATGTAACGAATACGGGGGATAAAG GTTTTGTCGCCCGTATGACCCGCGTACCGGAAAATGCAGTACAGCAGGCGCTGGCCGGTAAAGGTCGCAAAGTCACGTCA CTACTGAAGCCTGTGGCGTGGATGTTCGTCATCGCCGCTCTGCTGATCGCACTCGATTCTGCGGCAGGCGTAGGGGTGCT GATACTGTTGCAGCACGGCATTGACTCCGGTGTCGCCGCAGGCGATATGTCGATCATCGGCCTCTGTGCCCTGCTCGCCC TGTGCCTGGTCATTGTGGGCTGGTGCAGTTATTCTCTGCAGACGGTCTTCGCCGCCAGAGCGGCGGAATCAGTTCAGCAT TCGGTGCGCTTGCGCAGCTTCGGCCATATGCTGCGTCTTGGACTCCCCTGGCATGAAAAGCATGCCGATTCGCGTCTTAC CCGCATGACCGTTGATGTGGACTCTCTCGCCCGCTTTCTGCAAAACGGCCTTGCCGGTGCGGCCACCAGTCTGGTGACGA TGTTCGCAATCGCCGCCACCATGTTCTGGCTCGACCCGTTCCTGGCGCTGACGGCATTAAGCGCAGTGCCAGTGGCCGCA CTGGCAACCATGATTTATCGCCGCCTCAGTACCCCTGCTTATGCACAGGCACGGCTGGAAATAGGCAAAGTCAACAGCAC CCTGCAGGAAAAAGTCTCTGGCCTGCGTGTCGTGCAATCGCATGGTCAGCAGGAACTGGAGGGCGCCCGGCTGCGCGCGT TATCGGAGCGTTTCCGCGCAACCCGTGTGCGAGCACAAAAATACCTTGCAGTCTATTTTCCGTTCCTGACATTCTGCACC GAGGCCTCCTATGCCGCCGTTCTGTTAGTGGGAGCTTCGCAGGTCGCCGCTGGAGAAATGACTGCCGGGGTACTGGCGGC TTTCTTCCTGTTGCTGGGGCAATTCTATGGGCCAGTGCAGCAGTTATCAGGGATTGTCGACGCCTGGCAGCAGGCGACAG CCAGCGGCAAACATATTGATGAACTACTGGCGACAGAAGGCACTGAGAACCTCGGGTCCTCTTCGGTCCTCCCTGTCACC GGTGCACTGCATCTTGATGAGGTCACGTTCAGTTATCCCGACAGTCACGAGCCAGCTCTGAACAAACTTACCCTGACGAT CCCAGAGGGAATGGTTGTCGCGGTCGTCGGTCGCAGCGGTGCGGGTAAGTCGACGCTGATTAAGCTGATTGCCGGGTTGT ATTTCCCCACGCACGGCAACATCAGAATCGGTGTGCAAATGCTCGATGATGCCTCGCTCACTGAGTATCGTCGCCAGATT GGGCTTGTCGATCAGGATGTAGCACTGTTTAGTAGTGATATTGCAGAAAACATTCGTTATTCACGGCCATCCGCCACCAA TGAAGACGTTGAAATTGCCTCACAGCGGGCAGGGCTGTATGAGATGGTGTGCAATCTGCCGCAGGGATTCCGGACACCGG TGAATAACGGCGGAGCCGATCTGTCCGCAGGTCAGCGCCAGTTGATTGCGCTGGCCCGCGCGCAACTGGCGAATGCCCAC ATCCTGCTGCTCGACGAAGCCACGTCATGTCTGGATCGCACATCCGAAGAACGACTGATGTCATCGTTAACAGATGTCGT GCATGCCGGGAAGCACTCGGCGCTGATTGTTGCACATCGTCTGACCACCGCGCAACGCTGCGATCTGATTGCCGTTATTG ATAAGGGGTTACTTGCGGAATACGGAACCCACGAACAGCTGTTATCTGCGGGCGGCCTCTATACCCGCTTATGGCATGAC AGCGTCAGCAGTACTGCGCTCCATCGCCAGCACAACATGAAGGAGGAAACCCCGGGATAG Protein sequence : MPANHTPTPANSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACGLLLIALVDFI GNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVFTYYIAGIAVML WMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVR IGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFAL IDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSDISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIW LNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERG TNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMV DTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTNTGDKGFVARMTRVPENAVQQALAGKGRKVTS LLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVAAGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQH SVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPVAA LATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCT EASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTENLGSSSVLPVT GALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQI GLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLSAGQRQLIALARAQLANAH ILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHD SVSSTALHRQHNMKEETPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iroC | YP_402681.1 | ABC transporter protein | VFG1653 | Protein | 0.0 | 99 |
