Gene Information

Name : yecC (SBO_1089)
Accession : YP_407562.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1098640 - 1099392 bp
Length : 753 bp
Strand : +
Note : Code: E; COG: COG1126

DNA sequence :
ATGAGTGCCATTGAAGTTAAGAACCTGGTGAAAAAATTCCAAGGTCAGACGGTGCTGCACGGTATCGACCTCGAGGTAAA
GCCTGGCGAAGTGGTGGCAATTATCGGTCCGAGTGGTTCCGGCAAAACCACGTTGCTACGCAGCATAAATCTGCTGGAAC
AACCGGAAGCGGGAACGATCACCGTTGGCGATATCACTATTGATACTGCACGTTCATTAAGTCAGCAAAAATCGCTGATT
CGCCAGTTGCGTCAGCACGTCGGGTTTGTCTTCCAGAACTTTAATTTGTTTCCGCATCGTACGGTGCTGGAAAACATTAT
TGAAGGGCCGGTGATCGTCAAAGGCGAACCGAAAGAAGAGGCCACGGCGCGCGCTCGCGAGCTGCTGGCGAAAGTTGGGC
TGGCCGGTAAAGAAACCAGCTATCCACGTCGTTTGTCTGGCGGTCAACAGCAGCGTGTAGCGATTGCGCGTGCGCTGGCA
ATGCGTCCTGAGGTGATTTTGTTTGACGAGCCAACGTCAGCGCTGGATCCAGAGCTGGTGGGCGAAGTCCTGAACACAAT
CCGCCAGCTGGCGCAGGAAAAGCGCACGATGGTGATTGTGACGCACGAAATGAGCTTTGCCCGGGATGTTGCGGACCGGG
CGATTTTTATGGACCTGGGGCGGATAGTCGAGCAGGGGGCAGCAAAAGCGTTATTTGCCGATCCCCAGCAGCCTCGCACC
CGACAGTTCCTCGAGAAGTTTCTGCTGCAATAA

Protein sequence :
MSAIEVKNLVKKFQGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLI
RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDLGRIVEQGAAKALFADPQQPRT
RQFLEKFLLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yecC YP_407562.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 2e-24 41