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Name : cobT (SBO_1212) Accession : YP_407674.1 Strain : Shigella boydii Sb227 Genome accession: NC_007613 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 1210343 - 1211368 bp Length : 1026 bp Strand : + Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGTCGCGTGCACAACGGCATATCGACGGGTTACTCAAACCTGTTGGTAGCCTGGGAAGGCTGGAGGCGCTTGCCATACA ACTGGCAGGAATGCCGGGGTTGAATGGCGTTCCGCATGTGGGCAAAAAAGCGGTACTGGTCATGTGTGCCGATCACGGCG TCTGGGAGGAAGGGGGCGCTATTTCCCCAAAAGAAGTGACAGCCATTCAGGCTGAAAATATGACCCGCGGAACAACCGGC GTGTGTGTGCTGGCAGCACAAGCGGGCGCTAACGTCTACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGG GCTTATCAACATGCGTGTTGCTCGAGGTAGTGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCATCAGGCAGAAAAGT TGCTTTTGGACGTCATATGTTATACGCGGGAGCTGGCAAAAAACGGTGTTACGCTGTTTGGTGTAGGTGAACTGGGGATG GCAAACACGACACCGGCAGCGGCAATAGTCAGCACAATCACTGGCCGGGCTCCTGAAGAAGTGGTTGGGATTGGCGCAAA CCTGCCGACAGATAAACTGGCTAATAAAATTGATGTTGTGCGCCGGGCGATTACGTTGAATCAACCAAATCCGCAGGATG GCGTTGATGTCCTGGCAAAAGTGGGTGGATTTGATTTGGTCGGAATGGCTGGCGTGATGTTAGGCGCTGCGTCCTGCGGT TTACCCGTGTTGCTGGATGGATTTCTTTCTTATGCTGCTGCGCTCGCAGCCTGTCAGATGTCTCCTGCAATCAAACCGTA TCTCATTCCTTCTCACCTGTCGGCAGAAAAAGGAGCGCGTATAGCGCTGTCGCATTTGGGGCTGGAGCCTTATCTCAATA TGGAGATGCGTTTAGGTGAGGGGAGTGGCGCAGCTCTGGCGATGCCCATCATCGAAGCTGCCTGTGCGATATATAACAAC ATGGGCGAACTTGCTGCCAGTAATATTGTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAA Protein sequence : MSRAQRHIDGLLKPVGSLGRLEALAIQLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGGAISPKEVTAIQAENMTRGTTG VCVLAAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYTRELAKNGVTLFGVGELGM ANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCG LPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACAIYNN MGELAASNIVLPGNTTSDLNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 1e-154 | 97 |
