Gene Information

Name : nanA (SBO_3164)
Accession : YP_409492.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Unknown
Product : N-acetylneuraminate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : 4.1.3.3
Position : 3168898 - 3169791 bp
Length : 894 bp
Strand : +
Note : aldolase; catabolism of sialic acid; not K12?; catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid

DNA sequence :
ATGGCAACGAATTTACGTGGCGTAATGGCTGCACTCCTGACTCCTTTTGACCAACAACAAGCACTGGATAAAGCGAGTCT
GCGTCGCCTGGTTCAGTTCAATATTCAGCAGGGCATCGACGGTTTATACGTGGGTGGTTCGACCGGCGAGGCCTTTGTAC
AAAGCCTTTCCGAGCGTGAACAGGTACTGGAAATCGTCGCCGAAGAGACGAAAGGTAAGATTAAACTCATCGCCCACGTC
GGTTGCGTCAGCACCGCCGAAAGCCAACAACTTGCGGCATCGGCTAAACGTTATGGCTTCGATGCCGTCTCCGCCGTCAC
GCCGTTCTACTATCCTTTCAGCTTTGAAGAACACTGCGATCACTATCGGGCAATTATTGATTCGGCGGATGGTTTGCCGA
TGGTGGTGTACAACATTCCAGCCCTGAGTGGGGTAAAACTGACCCTGGATCAGATCAACACACTTGTTACATTGCCTGGC
GTAGGTGCGCTGAAACAGACCTCTGGCGATCTCTATCAGATGGAGCAGATCCGTCGTGAACATCCTGATCTTGTGCTCTA
TAACGGTTACGACGAAATCTTCGCCTCTGGTCTGCTGGCGGGCGCTGATGGTGGTATCGGTAGTACCTACAACATCATGG
GCTGGCGCTATCAGGGGATCGTTAAGGCGCTGAAAGAAGGCGATATCCAGACCGCGCAGAAACTGCAAACTGAATGCAAT
AAAGTCATTGATTTACTGATCAAAACGGGCGTATTCCGCGGCCTGAAAACTGTCCTCCATTATATGGATGTCGTTTCTGT
GCCGCTGTGCCGCAAACCGTTTGGACCGGTAGATGAAAAATATCTGCCAGAACTGAAGGCGCTGGCCCAGCAGTTGATGC
AAGAGCGCGGGTGA

Protein sequence :
MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEETKGKIKLIAHV
GCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN
KVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3385 YP_002414056.1 N-acetylneuraminate lyase Not tested Not named Protein 2e-99 66