Gene Information

Name : glcB (HCH_01653)
Accession : YP_432932.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 1668801 - 1671074 bp
Length : 2274 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGAAGCGTCTGCGGCGATCTTTGCGGCATCATGTCGCACAGGTCTGTCGATGCGCGAAGGGATTCAGGAAACCACAAGA
GAGTGTGTTGAGGCTTACTATGACAGATAGAGTACAAGTAGGCGGCTTACAGGTCGCCAAGGTTCTGTACGACTTTGTAA
ATGAAAAAGCGATCCCCGGAACTGGCGTTTCTGCGGATAAGTTCTGGTCCGAGCTGGAAGCCGTCGTTAACGAAATGGCT
CCCAGAAACAAGGCGTTACTGAAAAAACGCGATGAACTGCAGGCGCAGATCGACGCCTGGCACCGCGAGAACCCAGGTAA
GGTCGATCTGTCGGCCTATAAAACATTTCTACAAGACATCGGTTATTTGGCGCCGGAAGCGGACGACTTCCAGATCGCCA
CCGCCAATGTGGACCCGGAAATCGCCACTATGGCCGGTCCGCAGCTGGTTGTGCCGGTGATGAACGCCCGTTTCGCCCTT
AATGCCGCCAATGCGCGCTGGGGCAGTCTGTACGACGCGCTGTACGGCACTGACGTTATCTCCGAAGAAAACGGCGCGGA
AAAGGGTAAAGGCTATAATCCGGTGCGCGGCGCCATGGTCATCGAGTTCGCCCGTAAGTTTCTGGACGAAGCCGCTCCTC
TGGCCTCCGGCAGCCATAAGGACTCCATCGGCTATAGCATAGAAAGCGGACGTCTGGCGGTGAAACTGCAGTCCGGCGCC
AGCATCGGTCTGTTGGATGAAAGCAAACTGGCCGGCTACGTCGGCGAACCCTCCGCGCCTGAAGGCATTCTGCTGCAAAA
CAATGGATTGCGTTTCGAGGTTCAGATCGACGCTGACAGCCCTATCGGTAAAACCGATCCCGCCGGCGTTAAAGACGTTC
TGATGGAAGCGGCCCTGACCACTATTCAGGACTGTGAAGACTCCGTCGCTGCGGTGGACGCGGAAGACAAAGTGGTGGTT
TACGGCAACTGGCTGGGTCTGATGAAAGGCGATCTGGCGGAAACCTTCAACAAGGGAGGCAAATCCGTTACCCGTACGTT
GCACGCAGACCGTGAGTATATCGCCCCGAATGGCGAGCGTTTCAGTTTGCCGGGACGCAGCCTGTTGTTCGTGCGCAACG
TCGGTCATTTGATGACGATCGACGCCGTGCTCGACAGCAACGGTGAAGAAATTCCGGAAGGCATACTGGACGGCATGATG
ACGTCGCTGATCGCCATGCATGATCTGAAAGGCGCAGGCCCTCTGCGCAACAGCAAGACCGGCAGCGTTTATATTGTTAA
GCCCAAGATGCATGGCCCGGAAGAGGTGACGTTCACCAACGACCTGTTCGCCCGTATCGAAGATGCGCTGGAATTGCCGC
GCTTCACTCTGAAAGTCGGCATCATGGACGAAGAGCGTCGCACTACCATCAATTTGAAGGCGTGTATCAAGGCGGCGGCG
GATCGGGTGGTGTTCATCAATACCGGATTCCTGGACCGCACGGGCGATGAAATCCACACCAGTATGGAAGCGGGCCCGGT
GGTGCGTAAGGCGGCGATGAAGCAACAGCCCTGGATCAACGCTTATGAAGACTGGAACGTGGATACCGGTCTGGCGGCAG
GTCTGAAAGGCAAAGCGCAAATCGGCAAAGGCATGTGGCCGATTCCCGATGAAATGGCGCAGATGCTTCAGGCCAAAATT
GGCCACCCGCAAGCGGGCGCCAACTGCGCCTGGGTGCCGTCTCCCACTGCTGCGACCTTGCACGCCTTGCATTATCACAA
GGTAAGCGTGGCGGCGCGTCAGGAGGAGCTCGCCTCCCGTAAGCGGGCGTCTCTGGATGATATCCTGACTATTCCATTGC
TGGGCGACCAGGCTTTGTCCGCACAGGATATCCAGCAGGAGCTGGATAATAACGCGCAGGGCATCCTGGGGTATGTTGTA
CGCTGGGTCGATCAGGGCGTGGGTTGTTCCAAAGTGCCTGATATTAACGACGTGGGCCTGATGGAAGACCGCGCCACGTT
GCGGATTTCCAGCCAGCATATCGCCAACTGGCTGCGCCATGGCGTTTGCTCGAAGGAGCAGGTGCTGGAAACCATGCAGC
GTATGGCGGCGATCGTGGATCGTCAGAACGCTGGCGACCCCAGCTATCGCAACATGGCTCCGAATTTTGACGATAGCGTG
GCGTTTCAAGCCGCCTGCGACTTGGTGCTGAAAGGTTGCGAACAGCCTAACGGTTACACCGAGCCGTTGCTGCATGCATA
TCGTCGCAAGGCGAAGGCAAAATTCGGCGGTTGA

Protein sequence :
MKRLRRSLRHHVAQVCRCAKGFRKPQESVLRLTMTDRVQVGGLQVAKVLYDFVNEKAIPGTGVSADKFWSELEAVVNEMA
PRNKALLKKRDELQAQIDAWHRENPGKVDLSAYKTFLQDIGYLAPEADDFQIATANVDPEIATMAGPQLVVPVMNARFAL
NAANARWGSLYDALYGTDVISEENGAEKGKGYNPVRGAMVIEFARKFLDEAAPLASGSHKDSIGYSIESGRLAVKLQSGA
SIGLLDESKLAGYVGEPSAPEGILLQNNGLRFEVQIDADSPIGKTDPAGVKDVLMEAALTTIQDCEDSVAAVDAEDKVVV
YGNWLGLMKGDLAETFNKGGKSVTRTLHADREYIAPNGERFSLPGRSLLFVRNVGHLMTIDAVLDSNGEEIPEGILDGMM
TSLIAMHDLKGAGPLRNSKTGSVYIVKPKMHGPEEVTFTNDLFARIEDALELPRFTLKVGIMDEERRTTINLKACIKAAA
DRVVFINTGFLDRTGDEIHTSMEAGPVVRKAAMKQQPWINAYEDWNVDTGLAAGLKGKAQIGKGMWPIPDEMAQMLQAKI
GHPQAGANCAWVPSPTAATLHALHYHKVSVAARQEELASRKRASLDDILTIPLLGDQALSAQDIQQELDNNAQGILGYVV
RWVDQGVGCSKVPDINDVGLMEDRATLRISSQHIANWLRHGVCSKEQVLETMQRMAAIVDRQNAGDPSYRNMAPNFDDSV
AFQAACDLVLKGCEQPNGYTEPLLHAYRRKAKAKFGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58