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Name : ccmF (HCH_04364) Accession : YP_435495.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4508955 - 4510976 bp Length : 2022 bp Strand : - Note : TIGRFAMsMatches:TIGR00353 DNA sequence : ATGATCGCTGAGCTAGGCCACTTCGCACTGATTTTAAGTTTTTGTTTCGCAATCTTGTTGGCGGTTACGCCCATCGCCGG CGCCTGGATCGGCGATCGTCTGTGGATGCGATTATCCCGTCCTTTGGCGGGCGCTCAGTTTCTGATGGCCACGGTGGCGT TCGCCGCGTTAACAACCTCTTTTCTTCAGGACGATTTCAGCGTCCGCTATGTGGCGGGGCACTCCAATAGCCTGTTGCCC TGGTATTACAAATTCAGCGCTGTGTGGGGCGGCCACGAAGGCTCATTGCTACTGTGGGCGTTGATTCTGACCGGCTGGAC CGCCGCCGTGGCCAAATTCAGCAAACAACTGCCGCTGGAGATGGTGGCGCGTGTACTGGGCGTCATGGGCATGATCAGCA TCGGCTTTATGTTGTTCATCCTGCTGACCTCCAACCCCTTCTTACGCTACCTGCCGAATTCGCCGCAGGACGGCGCCGAC CTGAACCCATTGTTGCAGGACTTCGGTCTGATTGTGCATCCGCCTATGTTGTATATGGGCTATGTTGGTTTCTCCGTCGC TTTCGCATTTGCGGTGGCTGCGCTGATGGGCGGTCGCCTGGACGCAGCATGGGCGCGCTGGTCGCGTCCCTGGACGACGG TGGCCTGGGCGTTTTTGACTCTGGGCATCGCGTTAGGCAGCTGGTGGGCCTACTACGAACTGGGTTGGGGCGGCTGGTGG TTTTGGGACCCGGTAGAAAACGCGTCCTTTATGCCCTGGTTGGCGGGCACGGCTTTGATGCACTCCCTGGCGGCGACGGA AAAGCGCGGCGTTTTCAAAAGCTGGACCGTCTTGCTGGCGATATTTGCTTTCTCGCTTAGCCTGCTGGGCACCTTTCTGG TTCGCTCCGGCATTTTGACCTCAGTGCATGCTTTCGCCTCAGATCCTGAACGGGGGCGCTTCGTGCTCATGATGCTGGGC GTGGTGATTGGCGGCTCGCTGCTGCTATACGCCTTGCGCGCGCCAGTAGTGAAAAGCCGCATTGGCTTCAGCGAAACCTC CCGGGAAGTGTTCCTGCTGGTTAACAACATTATTCTTGTGGTCGCTATGCTGACAGTATTGATCGGCACATTGGCTCCGT TGGTGGCGGAGTGGATGGATAAGGAAATCTCCGTCGGCGCTCCCTATTTCAATTTGATGTTCTCCCTGTTGGCCCCTTTA TTGGTCATCGTGATGGGCATAGGCATGTACAGTCACTGGAAGGACACCAAAGCCGCGCAGCTGCTGGGTCCTGTCCCCAT GCTTTTGTCGGTCAGCGCAGTTCTTTCCGTTGCGATTCCCTGGATGTATGGGGAAATCCTTTTGATGGCGGTTATTGGCG TTTTTATCGCCGTATGGTTGTTCGCCGCGACTCTGCGCGACGCCTGGCTCAAAAGCGCTTCCTCTCAAGGACGCGTACGT GGCTGGTTGCGTACTTCCCGTAGCTACAAAGGTATGGTGTTGGGCCATCTGGGCCTGGCGGTGACCATCGTTGGCGCGAC CATGGTGTCGCAATACACGCTGGAGCGGGACGTGCGCCTGGCGCCGGGGCAATCTGTTGAGCTGGCGGGCTTCACCTTCC GTTTTGACGAAGAAACCCAGCGTCGCGGTCCAAACTTTATTGGCGATCGCGCCACCATTTCGATTCTCGACAGCGACGGT GAAGTGTTGCATGTTCTGCATCCGGAAAAGCGCCGCTATCAGGTGTCCGGTAATGTGATGACGGAAGCGGGCATCGATCC AGGACTGTTCCGGGATCTCTACGTTTCTTTGGGCGAATCTCTGGATGACGAGTCCTGGACCATGCGCGTGCAATACAAGC CCTTTGTGCGCTGGCTCTGGTTGGGCGGCGTATTCATGGCCTGGGGTGGTTTCCTGGCGGTGGCGGACAGGCGTTATCGC ATCAAGTTGAAACGCAGGCTTACGGCGGCGGAAGCCATGGATAGCGGCGACGGTCGGAAGTCGAATGGCGAGGCCGACGC TCTGGGAGGACAGCAGGCGTGA Protein sequence : MIAELGHFALILSFCFAILLAVTPIAGAWIGDRLWMRLSRPLAGAQFLMATVAFAALTTSFLQDDFSVRYVAGHSNSLLP WYYKFSAVWGGHEGSLLLWALILTGWTAAVAKFSKQLPLEMVARVLGVMGMISIGFMLFILLTSNPFLRYLPNSPQDGAD LNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAVAALMGGRLDAAWARWSRPWTTVAWAFLTLGIALGSWWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAATEKRGVFKSWTVLLAIFAFSLSLLGTFLVRSGILTSVHAFASDPERGRFVLMMLG VVIGGSLLLYALRAPVVKSRIGFSETSREVFLLVNNIILVVAMLTVLIGTLAPLVAEWMDKEISVGAPYFNLMFSLLAPL LVIVMGIGMYSHWKDTKAAQLLGPVPMLLSVSAVLSVAIPWMYGEILLMAVIGVFIAVWLFAATLRDAWLKSASSQGRVR GWLRTSRSYKGMVLGHLGLAVTIVGATMVSQYTLERDVRLAPGQSVELAGFTFRFDEETQRRGPNFIGDRATISILDSDG EVLHVLHPEKRRYQVSGNVMTEAGIDPGLFRDLYVSLGESLDDESWTMRVQYKPFVRWLWLGGVFMAWGGFLAVADRRYR IKLKRRLTAAEAMDSGDGRKSNGEADALGGQQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-126 | 54 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-137 | 53 |
