Gene Information

Name : rnhA (SRU_1185)
Accession : YP_445310.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Unknown
Product : RNase H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 1496687 - 1497271 bp
Length : 585 bp
Strand : -
Note : identified by match to protein family HMM PF00075

DNA sequence :
TTGGAAGTGCGTGGTTTTGCTTTACGCCCGCCCTGCACTCAAGGTTTTCACGGGGCTTTTTCGGCGCGGTCCTGGACCTG
TCCGGCCCCGCCGCGTACGTTTGAAAGCATTCGCTCTCTCTTTTGCTTTTTCGGCTTTATGAACGAGGTCACCATCTACA
CCGACGGCGCCTGCAGCGGGAATCCGGGGCCCGGCGGCTGGGCCGCCATCCTCCTCCCCGACGACGACTCGGACGCCACC
GATCCGCTCACCGGCGGGGAGCCCCATACCACCAACAACCGGATGGAGCTGACGGCCGCCCTGGAGGCGCTCCGGGCCCT
CGACGACCGGAGTCGGGTCGCGCTCCACACCGACAGCGAGTACCTCTCGAAGGCGTTCAACGAGGGATGGCTCGACAGTT
GGCAGGACAACAACTGGCAGACCTCCTCGAACGACGACGTCAAGAACCAGGACCTGTGGAAGGCGCTCCTCGAGGAGGCG
GACCGGCACGAGGTCGACTGGGTCTGGGTGAAGGGCCACGCCGACGACGAGTTGAACATTATGGCCGACGAGTTGGCCGT
GGCCGCGATGGAGCAATATAAGTGA

Protein sequence :
MEVRGFALRPPCTQGFHGAFSARSWTCPAPPRTFESIRSLFCFFGFMNEVTIYTDGACSGNPGPGGWAAILLPDDDSDAT
DPLTGGEPHTTNNRMELTAALEALRALDDRSRVALHTDSEYLSKAFNEGWLDSWQDNNWQTSSNDDVKNQDLWKALLEEA
DRHEVDWVWVKGHADDELNIMADELAVAAMEQYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-17 43