Name : rnhA (SRU_1185) Accession : YP_445310.1 Strain : Salinibacter ruber DSM 13855 Genome accession: NC_007677 Putative virulence/resistance : Unknown Product : RNase H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1496687 - 1497271 bp Length : 585 bp Strand : - Note : identified by match to protein family HMM PF00075 DNA sequence : TTGGAAGTGCGTGGTTTTGCTTTACGCCCGCCCTGCACTCAAGGTTTTCACGGGGCTTTTTCGGCGCGGTCCTGGACCTG TCCGGCCCCGCCGCGTACGTTTGAAAGCATTCGCTCTCTCTTTTGCTTTTTCGGCTTTATGAACGAGGTCACCATCTACA CCGACGGCGCCTGCAGCGGGAATCCGGGGCCCGGCGGCTGGGCCGCCATCCTCCTCCCCGACGACGACTCGGACGCCACC GATCCGCTCACCGGCGGGGAGCCCCATACCACCAACAACCGGATGGAGCTGACGGCCGCCCTGGAGGCGCTCCGGGCCCT CGACGACCGGAGTCGGGTCGCGCTCCACACCGACAGCGAGTACCTCTCGAAGGCGTTCAACGAGGGATGGCTCGACAGTT GGCAGGACAACAACTGGCAGACCTCCTCGAACGACGACGTCAAGAACCAGGACCTGTGGAAGGCGCTCCTCGAGGAGGCG GACCGGCACGAGGTCGACTGGGTCTGGGTGAAGGGCCACGCCGACGACGAGTTGAACATTATGGCCGACGAGTTGGCCGT GGCCGCGATGGAGCAATATAAGTGA Protein sequence : MEVRGFALRPPCTQGFHGAFSARSWTCPAPPRTFESIRSLFCFFGFMNEVTIYTDGACSGNPGPGGWAAILLPDDDSDAT DPLTGGEPHTTNNRMELTAALEALRALDDRSRVALHTDSEYLSKAFNEGWLDSWQDNNWQTSSNDDVKNQDLWKALLEEA DRHEVDWVWVKGHADDELNIMADELAVAAMEQYK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-17 | 43 |