Gene Information

Name : Msp_1003 (Msp_1003)
Accession : YP_448034.1
Strain : Methanosphaera stadtmanae DSM 3091
Genome accession: NC_007681
Putative virulence/resistance : Unknown
Product : NifU protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0822
EC number : -
Position : 1151621 - 1152007 bp
Length : 387 bp
Strand : +
Note : involved in Fe-S cluster formation; COG0822, pfam01592; predicted membrane protein

DNA sequence :
ATGCAATATAGTGATAAAGTAGTAGATCATTACACAAATCCAAGAAATACTGGAGTAATTAAAAATCCAGATGGTGAAGG
AACTGTGGGAAACCCAGTATGTGGGGATATAATGACAATCTACATAAAAGTAGATGATGACAACAAATTATCTGACGTAA
AATTCAGTACATTTGGTTGTGGAGCAGCAATTGCTACAAGCAGTATGATAACAGAAATGGCTATTGGAATGGATGTTGAT
GAAGCATATCATATTACAAGAAACGATGTAGCAGATGAATTAGATGGCCTACCACCAATTAAATTACACTGTTCTAACTT
AGCAGCAGATGCTCTTCAAGCTGCTATTGAAAATTACAGAGAAAAAAAAGAAAAAGGTGAATTATAA

Protein sequence :
MQYSDKVVDHYTNPRNTGVIKNPDGEGTVGNPVCGDIMTIYIKVDDDNKLSDVKFSTFGCGAAIATSSMITEMAIGMDVD
EAYHITRNDVADELDGLPPIKLHCSNLAADALQAAIENYREKKEKGEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iscU AAT96059.1 IscU Not tested T-PAI Protein 4e-27 51