Gene Information

Name : XOO_2556 (XOO_2556)
Accession : YP_451585.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : extragenic supressor protein SuhB
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0483
EC number : -
Position : 2849150 - 2849983 bp
Length : 834 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGCAGAAACCCGCCGTCACCGTCATGGTCAAAGCCGCCCGCCTCGCCGGCAATGTGCTGTTGCGCGGTATCAACAAGCT
CGATGCGCTCAACGTGGTGCAGAAAGGCCGCATGGACTATGCCAGCGAAGTCGATGCCGACGCCGAGAAGGTCATCATCA
AGGAACTCAAGCGCGGCTATCCCGAATACGCCGTATTTGGCGAAGAAGGCGGCGTGCAGGGCGGCAAGAGTGGCCGCTAC
ACCTGGGTGATCGATCCGCTGGACGGCACCAGCAACTATCTGCGCGGCTTTCCGCACTACTGCGTTTCCATCGCACTGGT
GGAAAACGGCGAACCTATCGATGCGGTGATTTTCGATCCGCTGCGCAATGAGCTGTTCACTGCCAGCCGTGGTGTCGGCG
CGGTGCTCAACGACCGCCGCATCCGCATTGCCGAGCGCAAGGACCTGGAAGGCGCGATGGTCCACACCGGCTTCCCGCCG
CGCGAACGTGCGCGCGCCAGTGCGCAGCTCAAGTGCGTGGATGCGCTGCTGGTGCAGGCCGAAGACGTGCGTCGCACCGG
CTCGGCGGCGCTGGACCTGGCCTATGTGGCCTGCGGGCGCGCCGACGCCTATTTCGAAGCAGGCGTCAAAGCCTGGGACA
TCGCTGCCGGCGTTTTGCTGGTGCGCGAGGCCGGTGGCCGCGTTTGCGACTACAAGGGCGCCACTCCGCCGCGCATGGAC
AACATGGGCCCGCAGACGCAGCAGATCGTGGCCGGCAACATCAAGATCAGCGACGCGCTGCAGAAGGTCATCGTCAATAC
CGGCTATGCGCGCGAGTTCGACGCCACGTTCTGA

Protein sequence :
MQKPAVTVMVKAARLAGNVLLRGINKLDALNVVQKGRMDYASEVDADAEKVIIKELKRGYPEYAVFGEEGGVQGGKSGRY
TWVIDPLDGTSNYLRGFPHYCVSIALVENGEPIDAVIFDPLRNELFTASRGVGAVLNDRRIRIAERKDLEGAMVHTGFPP
RERARASAQLKCVDALLVQAEDVRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGVLLVREAGGRVCDYKGATPPRMD
NMGPQTQQIVAGNIKISDALQKVIVNTGYAREFDATF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
suhB AAT96064.1 SuhB Not tested T-PAI Protein 4e-46 48