Gene Information

Name : ELI_01435 (ELI_01435)
Accession : YP_457176.1
Strain : Erythrobacter litoralis HTCC2594
Genome accession: NC_007722
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 323867 - 326446 bp
Length : 2580 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAATCTCGAGAAATTTACCGACCGTGCCAAGGGCTTTCTGCAGGCCGCGCAGACGGTCGCGATCCGTATGAGCCACCA
GCGCATCACGCCGGCACATTTGCTCAAGGCGATGATCGAGGATCCGGAAGGCATGGCCTCCGGGCTGATAGCGCGTGCCG
GCGGCAATCCGCGCACGGTCGAAGACGAAGTCGATGCGGCGCTGGGCAAGATTCCGGCGGTGAGCGGGGGCGGAGCGCAG
CAGACGCCGGGCCTCGACAACGACACCGTGCGCATCCTCGACCAGGCCGAAACCATCGCCGACAAATCGGGCGACTCTTA
CGTCACCATCGAGCGGTTGCTCGTCGCGCTGGCGCTCGCCACCACCACATCGGCGGGGCAGGCGCTCAAGGCGGCCAATG
TCGATGCGAAGACCCTCGAAGCGGAAATCAGTGAGCTGCGCGGCGGGCGCACGGCGGACAGCGCCAACGCCGAAGAAGCC
TACGACGCGATGAAGAAATACGCCCGCGACCTCACCGAAGCTGCGCGCGAAGGCAAGCTCGACCCCGTGATCGGGCGCGA
CGAGGAGATCCGCAGGACGATCCAGATCCTTGCCCGCCGGACCAAGAACAACCCGGCGCTGATCGGCGATCCCGGCACCG
GCAAGACCGCCATCGCCGAAGGCCTCGCGCTGCGCATCGCCAATGGCGATGTGCCCGACAGCCTCAAGGGCCGTACGCTC
ATGTCGCTCGACATGGGCTCGCTCATCGCCGGCGCCAAATATCGCGGCGAATTCGAGGAGCGCCTGAAAGCCGTGCTCGA
CGAAGTGAAGGGCGCCGACGGGCAGATCATCCTTTTCATTGACGAGATGCACACGTTGATCGGGGCCGGCGCGAGCGAAG
GCTCGATGGATGCGTCCAACCTCTTGAAGCCCGCGCTCAGCCGCGGCGAACTGCACTGCATCGGCGCGACGACGCTCGAC
GAATATCAGAAATATGTCGAGAAGGACCCGGCGCTGCAGCGGCGCTTCCAGTCGGTCTATATCGACGAGCCGAGCGTCGA
GGACACGATCAGCATCCTGCGCGGCATTGCCGAGAAATATGAACTGCATCACGGCGTGAACATCACCGACGGCGCGCTGG
TGGCGGCGGCGCGGCTGTCCGATCGCTATATCCAGAACCGCTTCCTGCCCGACAAGGCGATCGACCTGATGGACGAGGCC
GCCTCGCGCATCCGCATGGAAGTGGAGAGCAAGCCCGAAGAGATCGAGAATCTCGATCGCCGCATAATCCAGCTCAAGAT
CGAAGAGCAGGCGCTCGAGAAAGAGACCGACAGCGCGTCCAAGGACCGCCTCGAAACCCTGCGCAAAGAATTGTCCGAAC
TCGAACAGAAATCGTCCGAACTGACCACGCGCTGGCAGAACGAGCGCGACAAGATCCAAGGCGAGACCAGGATCAAGGAA
GAACTCGACCAGGCGCGGATCGAACTCGAGCAGGCCGAGCGGTCGGGCGATCTCGCCAAGGCCGGCGAGCTGTCCTACGG
GCGAATCCCAGAGCTGGAAAAGAAGCTCGAGGAAGCGCGCGCGACCACGGAAAACGCGCTGCTCAAGGAAGAAGTGACCG
AAGACGATATCGCCAGCGTCGTTTCACGCTGGACCGGCATCCCCATCGACAAGATGCTCGAGGGCGAGCGCGACAAGCTG
CTCAAGATGGAAGAGCTGCTGTCGAAGCGCGTGATCGGCCAGGAAGAGCCCATTATCGCCGTGTCCAAGGCCGTCCGCCG
CGCGCGCGCGGGGTTGCAGGATCCGGGCCGCCCGCTCGGCAGTTTCCTGTTCCTCGGGCCGACCGGCGTCGGCAAGACCG
AACTGACCAAGGCGCTGGCCGGGTTCCTGTTCGATGATGACGACGCCATGGTCCGCATCGACATGTCCGAATTCATGGAG
AAACATTCGGTCGCCCGCCTGATCGGCGCACCTCCGGGCTATGTCGGCTATGACGAAGGCGGCGTGCTGACCGAGGCCGT
GCGGCGGCGGCCCTACCAGGTCGTGCTGTTCGACGAGGTCGAGAAGGCGCATACCGATGTTTTCAACGTGTTGCTGCAGG
TGCTCGACGATGGACGGCTGACGGACGGGCAGGGTCGGGTGGTGGATTTCAGCAACACGCTGATCATCCTGACCTCGAAT
CTCGGCAGCCAGTATCTCGCCAATATGGAGGATGGCCAGAAGGTCTCCGATGTCGAGCCGCAGGTGATGGACGTGGTGCG
CGGGCATTTCCGCCCCGAGTTTCTCAACCGGCTGGACGAGATCATCCTGTTCCACCGCCTGTCGATGGAGCACATGGCGC
CGATCGTCGATATCCAGGTGGGCCGCGTCCAGAAACTGCTGGCGGATCGCAAGATCGTGCTCGACCTGACCGATGCCGCC
AAGCGCTGGCTGGGGCGGGTCGGCTACGATCCGGTCTATGGCGCGCGCCCGCTCAAGCGCGCGGTGCAGCGCTACGTGCA
GGACCCACTCGCCGAACTGCTGCTGGAGGGCAAGGTGCCCGATGGAAGCACGGTCAAGATCGACGAGGGCGATGGCGAGT
TGGAAATGGAAGTCGCCTGA

Protein sequence :
MNLEKFTDRAKGFLQAAQTVAIRMSHQRITPAHLLKAMIEDPEGMASGLIARAGGNPRTVEDEVDAALGKIPAVSGGGAQ
QTPGLDNDTVRILDQAETIADKSGDSYVTIERLLVALALATTTSAGQALKAANVDAKTLEAEISELRGGRTADSANAEEA
YDAMKKYARDLTEAAREGKLDPVIGRDEEIRRTIQILARRTKNNPALIGDPGTGKTAIAEGLALRIANGDVPDSLKGRTL
MSLDMGSLIAGAKYRGEFEERLKAVLDEVKGADGQIILFIDEMHTLIGAGASEGSMDASNLLKPALSRGELHCIGATTLD
EYQKYVEKDPALQRRFQSVYIDEPSVEDTISILRGIAEKYELHHGVNITDGALVAAARLSDRYIQNRFLPDKAIDLMDEA
ASRIRMEVESKPEEIENLDRRIIQLKIEEQALEKETDSASKDRLETLRKELSELEQKSSELTTRWQNERDKIQGETRIKE
ELDQARIELEQAERSGDLAKAGELSYGRIPELEKKLEEARATTENALLKEEVTEDDIASVVSRWTGIPIDKMLEGERDKL
LKMEELLSKRVIGQEEPIIAVSKAVRRARAGLQDPGRPLGSFLFLGPTGVGKTELTKALAGFLFDDDDAMVRIDMSEFME
KHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHTDVFNVLLQVLDDGRLTDGQGRVVDFSNTLIILTSN
LGSQYLANMEDGQKVSDVEPQVMDVVRGHFRPEFLNRLDEIILFHRLSMEHMAPIVDIQVGRVQKLLADRKIVLDLTDAA
KRWLGRVGYDPVYGARPLKRAVQRYVQDPLAELLLEGKVPDGSTVKIDEGDGELEMEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 9e-110 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-110 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_01435 YP_457176.1 ATP-dependent Clp protease VFG2076 Protein 7e-121 44
ELI_01435 YP_457176.1 ATP-dependent Clp protease VFG2084 Protein 7e-113 43