Gene Information

Name : RHE_CH02075 (RHE_CH02075)
Accession : YP_469586.1
Strain : Rhizobium etli CFN 42
Genome accession: NC_007761
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2169218 - 2169934 bp
Length : 717 bp
Strand : +
Note : similar to AGR_C_3334p [Agrobacterium tumefaciens]; Similar to swissprot:Q8UEE4; location:bacterial cytoplasm Psort-Score: 0.2405

DNA sequence : 
ATGACAAGCCCGCCGCTGATCGAATTCAGGCAGGTCTCGAAAATCTACGGCGAGGGCGAGGCGGCGATCCGTGCGCTCGA
CCATGTCGATCTGGCGATCGCGGCCCATGAATTCGTCGCGATCATGGGTCCGTCCGGCTCCGGCAAGTCGACGGCGATGA
ACATCCTCGGCTGCCTCGACGTGCCGACATCAGGCGATTACATCTTCCAGGGTATCCCGACCAGCGGCTTCGACCGCAGC
CACCTGACGCTCCTTCGCCGCCACATGCTCGGCTTCGTCTTCCAGGGCTTCAATCTCCTGTCGCGAACCTCGGCTGTCGA
GAATGTCGAGCTACCGCTGATCTATCGCGGCATGGCCGTGCGTGAGCGGCGCGAACGGGCGCGCCAAGCTCTGGCGCTGG
TCGGTCTCACCGGGCGCGAGCACCACAAGACGCAGGAACTCTCGGGCGGCCAGCAGCAGCGCGTCGCCATCGCCCGCGCC
ATCGTCACCGAACCGGCGCTGCTGCTCGCCGATGAGCCCACCGGCAATCTCGACACCAAGACCAGCGTCGAGATCATGGA
TCTGCTGACGCGGCTGAACCGCGAGCAGGGCATCACCATCGTTATGGTCACGCATGAGCCAGATATCGCCGCCTATGCTG
AGCGGCTGCTGCGCTTTGTCGACGGCAAGCTCGAGACCGAGGTGGAGCACCGGAGGAGGGCGGATCATGTTCTTTGA

Protein sequence : 
MTSPPLIEFRQVSKIYGEGEAAIRALDHVDLAIAAHEFVAIMGPSGSGKSTAMNILGCLDVPTSGDYIFQGIPTSGFDRS
HLTLLRRHMLGFVFQGFNLLSRTSAVENVELPLIYRGMAVRERRERARQALALVGLTGREHHKTQELSGGQQQRVAIARA
IVTEPALLLADEPTGNLDTKTSVEIMDLLTRLNREQGITIVMVTHEPDIAAYAERLLRFVDGKLETEVEHRRRADHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_CH02075 YP_469586.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 3e-49 50
RHE_CH02075 YP_469586.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-38 47
RHE_CH02075 YP_469586.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 9e-36 45
RHE_CH02075 YP_469586.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 1e-36 42