|
Name : gap (RHE_CH03496) Accession : YP_470979.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : glyceraldehyde 3-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 3682853 - 3683863 bp Length : 1011 bp Strand : + Note : similar to gap (SMc03979) [Sinorhizobium meliloti]; Similar to swissprot:Q92M81; location:bacterial cytoplasm Psort-Score: 0.2212 DNA sequence : ATGACAGTCAAGGTTGCCATCAATGGTTTCGGCCGCATCGGCCGTAACGTCCTGCGCGCTATCGTCGAATCCGGCCGCAC CGACATCGAGGTCGTCGCCATCAACGACCTCGGCCCGGTCGAGACCAATGCCCATCTCCTGCGTTACGACTCGATCCACG GCAAGTTCCCGGCCGAAGTGAAGGTCGAAGGTGACACGATCATCGTTGGCGGCGGCAAGCCGATTAAGGTTACCGCGATC AAGGATCCGGCAACGCTGCCGCACCGCGAGCTCGGCGTTGACATCGCCATGGAATGCACCGGCATCTTCACCGCCCGCGA CAAGGCCGCCGCCCACCTGACGGCCGGCGCCAAGCGCGTCATCGTCTCGGCTCCCGCCGATGGCGCAGATCTCACCGTCG TCTACGGCGTCAACCATGACCAGCTCACCAAGGAGCATACGGTCATCTCCAACGCCTCCTGCACCACCAACTGCCTGGTG CCCGTTGTCAAGGTTCTCGACGACGCCGTCGGCATCGACCACGGCTTCATGACGACCATCCACTCCTACACCGGCGACCA GCCGACGCTCGACACGATGCACAAGGACCTGTATCGCGCCCGCGCAGCCGCCCTCTCGATGATCCCGACCTCGACGGGCG CAGCCAAGGCCGTCGGCCTCGTCCTGCCGCATCTCAAGGGCAAGCTCGACGGCACCTCGATCCGCGTTCCCACCCCGAAC GTTTCGGTCGTCGACTTCAAATTCGTCTCCAAGAAGGCCACCACGGTCGGCGAAATCAACGAAGCCATCAAGGCTGCCTC CAACGGCAAGCTGAAGGGCATCCTCGGCTACACCGACGAGCCGCTCGTCTCCCGCGACTTCAACCACGACAGCCACTCCT CGATCTTCGCGACCGATCAGACCAAGGTCATGGAAGGCAACTTCGTGCGCGTCCTGTCCTGGTATGACAACGAATGGGGC TTCTCCAGCCGCATGTCCGACACGGCCGTCGCCCTCGCCAAGCTCATCTGA Protein sequence : MTVKVAINGFGRIGRNVLRAIVESGRTDIEVVAINDLGPVETNAHLLRYDSIHGKFPAEVKVEGDTIIVGGGKPIKVTAI KDPATLPHRELGVDIAMECTGIFTARDKAAAHLTAGAKRVIVSAPADGADLTVVYGVNHDQLTKEHTVISNASCTTNCLV PVVKVLDDAVGIDHGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPHLKGKLDGTSIRVPTPN VSVVDFKFVSKKATTVGEINEAIKAASNGKLKGILGYTDEPLVSRDFNHDSHSSIFATDQTKVMEGNFVRVLSWYDNEWG FSSRMSDTAVALAKLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 1e-74 | 49 |
