Gene Information

Name : cspA1 (RHE_CH00560)
Accession : YP_468105.1
Strain : Rhizobium etli CFN 42
Genome accession: NC_007761
Putative virulence/resistance : Unknown
Product : cold shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 582428 - 582637 bp
Length : 210 bp
Strand : +
Note : similar to cspA1 (SMc04318) [Sinorhizobium meliloti] and mlr8184 [Mesorhizobium loti]; Similar to entrez-protein:Q9Z3S6; location:bacterial cytoplasm Psort-Score: 0.2930

DNA sequence :
ATGAACACAGGTACTGTTAAGTGGTTCAACGCAACCAAGGGCTTCGGCTTCATTCAGCCGGATGACGGCGCCGCCGACGT
TTTCGTCCACATTTCGGCCGTTGAGCGCGCCGGTATGCGTGACCTCAAGGATGGCCAGAAGTTGTCCTACGATCTCGTCC
GCGACAACAAGTCCGGCAAGATGTCGGCAGACCGCCTCCAGGCGGCCTGA

Protein sequence :
MNTGTVKWFNATKGFGFIQPDDGAADVFVHISAVERAGMRDLKDGQKLSYDLVRDNKSGKMSADRLQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-11 50