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Name : glcF (RHE_CH00810) Accession : YP_468348.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit F protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 849291 - 850601 bp Length : 1311 bp Strand : + Note : similar to glcF (SMc00926) [Sinorhizobium meliloti]; Similar to swissprot:Q92RS1; location:bacterial cytoplasm Psort-Score: 0.3322 DNA sequence : ATGCAAACCAACTTCACCCCCGCCCAGCTCGCCGACCCTGATGTCGCCGAATCGGAAAAAATTCTGCGCAAATGCGTCCA CTGCGGCTTCTGCACCGCCACCTGTCCCACCTATGTGACGCTCGGCAACGAGCTCGACAGTCCGCGCGGCCGCATCTATC TGATCAAGGACATGCTGGAAAACGGTCGGCCCGCTGATGCCGAAGTCGTCACTCATATCGACCGCTGCCTCTCCTGCCTT GCCTGCGTCACCACCTGTCCCTCGGGTGTCGACTATATGCATCTGGTCGATCACGCCCGCGCCCATATCGAAAAGACCTA CAAGCGTCCGTTGGTGAACCGGCTGACGCGCGCGCTCCTGGCGGCCGTGCTGCCCTATCCCGGCCGGTTCCGCCTGGCGC TCCATCTCGCCCGCCTCGGCCGCCCTTTCGCCGGCCTGATGCGCGGGGCGGCGCTCAAACCCTTCGCCGCCATGCTGGCG CTTGCACCACGGCGCCTTCCGGCCGCCTCGGATCTTTCAAAACCCGGCACCTACCGGGCGGAGGCGGATCGGCGTGGCCG GGTGGCGATCCTTGCCGGCTGCGCCCAGCCGGTGCTTGATCCCGGCATCAACGCGGCGGCGATCCGGCTCTTGACGCGGC TCGGTATCGAGGTTGTGGCGCCGAAGGGCGAGGTCTGCTGCGGTTCGCTCGTCCATCACATGGGCCGCGCCGAACAGGCG CTCGAAAGCGCGCGGGCCAATGTCGATGTCTGGACGCGCGAGATCGAAGGCCAGGGCCTCGACGCGATCATCATCACCGC TTCGGGCTGCGGCACGACGATCAAGGATTACGGCCACATGCTGCGGCTCGACCCCGCCTATGCGGCAAAGGCCGCCAGGG TCTCGGCGCTGGCAAAGGACATCACCGAATATCTGGCGACCCTCGACCTGCCGGCCCATATGCCGAGGGGCATCACGGTC GCCTATCACTCTGCCTGTTCGATGCAGCACGGCCAGCGCATCACCCTGGCGCCGAAATCCTTGCTGAATGCGGCGGGTTT TACGGTGCGCGATCCGGCCGAAGGCCATCTCTGTTGCGGCTCGGCCGGCACTTACAACATCATGCAGCCAGAGATTTCGG CGGCGCTGAAGGCGCGCAAGGTCAAAAACATCGAGGCCACCAAGGCCGATATCATCGCCACCGGCAACATCGGCTGCATC ACCCAGATCGCCACCGGCACCGCGATCCCGATCCTGCATACGGTCGAGCTGCTCGATTGGGCCTATGGCGGCGCTATGCC GGAAAAATTAACAGGTTTGCCATTAGGCTGA Protein sequence : MQTNFTPAQLADPDVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAEVVTHIDRCLSCL ACVTTCPSGVDYMHLVDHARAHIEKTYKRPLVNRLTRALLAAVLPYPGRFRLALHLARLGRPFAGLMRGAALKPFAAMLA LAPRRLPAASDLSKPGTYRAEADRRGRVAILAGCAQPVLDPGINAAAIRLLTRLGIEVVAPKGEVCCGSLVHHMGRAEQA LESARANVDVWTREIEGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSALAKDITEYLATLDLPAHMPRGITV AYHSACSMQHGQRITLAPKSLLNAAGFTVRDPAEGHLCCGSAGTYNIMQPEISAALKARKVKNIEATKADIIATGNIGCI TQIATGTAIPILHTVELLDWAYGGAMPEKLTGLPLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 1e-74 | 42 |
