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Name : nifS (CYA_1826) Accession : YP_475240.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 1831239 - 1832429 bp Length : 1191 bp Strand : - Note : identified by similarity to SP:P05341; match to protein family HMM PF00266; match to protein family HMM PF01212 DNA sequence : GTGATCTACCTGGACAACAACGCCACCACCGCCGTGGATCCCCTGGTTCTGGAGGCGATGCTGCCCTATTTGCAGACCTT CTACGGCAACCCCTCCTCGATGCACAGTTTTGGCGGCCAGGTGGGGCGTGCCCTTAACCAAGCCCGCGAACAGGTGGCAG CCCTTCTGGGAGCCGACCCGACGGAGATTGTCTTCACCAGTGGCGGCACCGAAGGCAACACCACGGCCATTTATGCAGCC TTGGCAGCCCAACCCCAGAAGCGCCACATCATCACCACGCAGGTAGAGCACGCCTCGGTGCTCAACGTCTGCAAGCACCT GGAAAAGCAAGGCTACCGCGTCACCTACCTCTCGGTGGATGAGCAAGGCTGCCTGGACTTGCTGGAGTTGGAAGCAGCCC TGACCGGCGATACTGCCCTGGTGAGCTGCATGGCCGCCAACAACGAGACGGGCGTGCTTTTCCCCATCGAGGCGGTGGGA TCCCTGGCTCGCAGCTATGGGGCTGTTGTCCATGTGGACGCAGTGCAGGCGGTGGGCAAGATCCCTCTCGATCTGCAGCG CCTGCCGGTGGATCTCCTCACCCTTTCCGGGCACAAGCTGCATGCCCCCAAGGGGATCGGCGCTCTCTATGTGCGGCGGG GCTTGCGCTTCCGTCCGTTGCTGCTGGGAGGGCATCAGGAGCGAGGCCGCCGCGCCGGGACGGAAAATGTGCCGGGCATC ATCGCCCTGGGCAAGGCAGCGGAGCTGGCCCAAGCCCACCTCGGGGATCCCCATGAGCGGCTGCTGCGGGATCGCTTGGA GCAGGGCTTGCTACAGCGGATCCCGGATGTCCAGGTTAACGGCCACCCCACTCAGCGGCTGCCCAACACCACCAACTTGG GCTTCAAGTTCGTGGAAGGGGAAGCGATCCTCTTCTGGCTGAACAAATACGGCATCTGCGCCTCCTCCGGCTCCGCCTGC ACTTCCGGATCCCTGGAACCCTCCCATGTGCTGCGGGCCATGCGCCTGCCCTACACCGTTTTGCACGGCTCAATCCGCTT CAGCCTCTCCCGCTTTACCCAGCCGGCAGAGGTGGAGCGGGTGCTGGAGGTTTTGCCGGGGATCATTGAGCATTTGCGGG CCATCTCCCCCTTCAGCCACGAGGCGGAAGACTGGCTGCAACAGCAGGAACGGGAACTGGCTCGCCGCTGA Protein sequence : MIYLDNNATTAVDPLVLEAMLPYLQTFYGNPSSMHSFGGQVGRALNQAREQVAALLGADPTEIVFTSGGTEGNTTAIYAA LAAQPQKRHIITTQVEHASVLNVCKHLEKQGYRVTYLSVDEQGCLDLLELEAALTGDTALVSCMAANNETGVLFPIEAVG SLARSYGAVVHVDAVQAVGKIPLDLQRLPVDLLTLSGHKLHAPKGIGALYVRRGLRFRPLLLGGHQERGRRAGTENVPGI IALGKAAELAQAHLGDPHERLLRDRLEQGLLQRIPDVQVNGHPTQRLPNTTNLGFKFVEGEAILFWLNKYGICASSGSAC TSGSLEPSHVLRAMRLPYTVLHGSIRFSLSRFTQPAEVERVLEVLPGIIEHLRAISPFSHEAEDWLQQQERELARR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-50 | 43 |
