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Name : secF (CYA_0075) Accession : YP_473568.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 72364 - 73359 bp Length : 996 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGACAGCTCAAGAGCTATCCCCCACCGATCCGGCAGTGGGATCCCGGCGGTCGCTTGACTACCGCTTCGACATCGTGGG TCGCAGCAGGCTGTGGTTTAGCTTGTCTCTGGCAGTGTTGCTGGTGGGGCTGGTCAGCATGGCTTTTTCCCTGGCCTCTC TGGGAACCCCCCTGCGGCTGGGGCTGGATTTTGCCGGCGGCACCTTGTTGGATCTGCGTTTTGAGCAGCCTGTCACCACC GACGAGCTGCGGCGGGCTCTGCAGGAACATGACCTGGGAACCAGCATCATCCAACTGGACACCCAGACGGGCCAAGAAGC CCTGATCCGCATGCCCCCTTTGACGGAGCAGGAGCGCCTGGCGGTAGAAGCCACGCTGCGGCAACAGATAGGCCCTTTTG AGCGCAAGCTGGTGGAGACGGTAGGCCCGACGGTGGGGCGTCTGCTCTTGCGCTCCGGCCTTGTGGCGGTGCTCATCTCC TTTGGGCTCATTGTGGTGTATCTGGCCCTGCGCTTCCAGTGGGATTACGCAGTGTTTGCCATTGTGGCCTTGCTGCACGA TGTGGTGCTGACAACAGGTCTGTTTGCCCTTTTGGGCCTGACGGTGGGCATGGAGGTGGACAGCCTGTTTTTGGTGGCGC TGCTAACCATCATTGGCTTTTCCGTCAACGACACAGTGGTTATCTACGACCGCATCCGGGAAAATCTGCGTCTGGTCAGC CGCAAGGTCAGCTTTGCCGAGGTGGTGAACCTGTCGTTGAACCAGACTTTTGCCCGCTCTTTGAACACCACCCTGACGAC GATGCTGCCCCTGGTGGCCATTGCCATTTTTGGGGGAGCCACCCTGAAGGGGTTTGCCATTGCTTTGCTCATCGGCTTCA GCTTGGGGGTTTATTCCAGCATCTTCATCGCCAGCCCCCTGCTGGTGTGGTGGCGGCAGCGGCGCTATGGCGCCAACAGG GATCCCAATCCCCTGCCTTCCGGCGCAGAGGGGTAG Protein sequence : MTAQELSPTDPAVGSRRSLDYRFDIVGRSRLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLDFAGGTLLDLRFEQPVTT DELRRALQEHDLGTSIIQLDTQTGQEALIRMPPLTEQERLAVEATLRQQIGPFERKLVETVGPTVGRLLLRSGLVAVLIS FGLIVVYLALRFQWDYAVFAIVALLHDVVLTTGLFALLGLTVGMEVDSLFLVALLTIIGFSVNDTVVIYDRIRENLRLVS RKVSFAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFSLGVYSSIFIASPLLVWWRQRRYGANR DPNPLPSGAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 8e-37 | 43 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 4e-37 | 43 |
