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Name : secF (CYB_1757) Accession : YP_477977.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1839900 - 1840901 bp Length : 1002 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGACGGCTCAAGAGCTATCCCCCGTAGATCCCGCCTCTCGGTTGCTCGACTATCGCTTCGACATTGTTGGACGGAGCAA GCTGTGGTTCAGCTTGTCCTTGGCGGTGCTGCTGGTGGGGCTGGTCAGCATGGCCTTTTCCCTAGCTTCTCTGGGAACCC CCCTGCGGCTGGGGTTGGATTTTTCCGGCGGCACTTTGCTGGATCTGAGCTTTGAGCGGCCTGTCACCACCGAGGAGCTG CGGCGGGCGCTGCAGGAACACAACCTGGGGAGCAGCATCATTCAACTGGACACCCAGACGGGCCAGGAAGCCCTGATCCG CATGCCCCCTTTGTCGGAGACGGAGCGCTTGGCCGTGGAAGCCACCCTGCGGCAGGAGGTTGCCCCCTTCCAGCGCAACC TGGTGGAGACAGTGGGCCCGACGGTGGGTCGTCTGCTCCTGCGTTCCGGCATCGTGGCCGTGCTCATCTCTTTCGGGCTC ATCGTGCTGTACCTGGCCCTGCGCTTCCAGTGGGATTACGCGGTGTTTGCCATTGTGGCGCTGCTGCACGATGTAGTGTT GACGATAGGGCTATTTGCCCTTTTGGGCCTGACGGTGGGTATGGAGGCGGACAGCCTGTTTGTGGTGGCGCTGCTGACCA TCATCGGCTTTTCCGTCAACGACACCGTGGTCATCTACGACCGCATCCGCGAGAATCTGCGTCTGGTGAGCCGCAAGGTC AGCCTGGCCGAGGTGGTAAACCTATCTCTGAACCAGACCTTTGCCCGCTCCCTGAACACCACTCTGACGACGATGCTGCC CCTAGTTGCCATCGCCATTTTCGGGGGAGCTACCTTGAAGGGGTTTGCCATTGCCCTGCTCATTGGCTTTACTTTGGGGG TGTATTCCAGCATTTTTATCGCCAGCCCCCTGTTGGTGTGGTGGCGGCAGCAGCGCTATGGCAAAAGTAGCGAAGATGCC CGCGCAGGCAGGGATCCCGATTCACTTCCCTCTGAGGGCTAG Protein sequence : MTAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLDFSGGTLLDLSFERPVTTEEL RRALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVEATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGL IVLYLALRFQWDYAVFAIVALLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKV SLAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFIASPLLVWWRQQRYGKSSEDA RAGRDPDSLPSEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-41 | 43 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 7e-42 | 43 |
