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Name : glcD (CYB_2846) Accession : YP_479029.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2942059 - 2943564 bp Length : 1506 bp Strand : - Note : identified by match to protein family HMM PF01565; match to protein family HMM PF02913; match to protein family HMM TIGR00387 DNA sequence : GTGCTCCGCACTGCCAGCGCAAAAACTTCTTCTCATCCTCTGCAAACTGGCCTCACCTTCGACTGGATCAGGCTGACGGC TGAGCTCAAAAAGATTCTGGATCCCCAGCGGGTGATCAGCAAGCCGGAGGAGCTGCTGGTTTACGAATGCGATGGGCTGG TCAGCTACCGGCAAAGGCCGGCGCTGGTGGTGCTGCCCCGCACAACAGAAGAGGTGGCGCAGGTGGTGAAGCTGTGCAGC CGCTACGGGGTGCCCTTCGTGGCGCGGGGATCCGGTACGGGCCTCTCAGGGGGAGCCCTGCCGGTGGAAAATAGCGTCGT CATCGCCACCACCCTGATGAAGCAGATCCTGGAAATCGACCTGGACAACCGCTGCATGGTGGTGCAGCCGGGGGTTATTA ACACTTGGATTACCCAGGCCGTGGCCGCCCAAGGCTACTTTTATGCGCCGGATCCCTCTAGCCAGTCGGTTTGCTCCATC GGAGGTAATGTGGCGGAGAACTCCGGCGGTGTCCACTGCCTCAAGTACGGCGTAACAGCCAACCACATTCTCGGCCTGAC GGTGGTGCTGCCGGATGGGGAGGTGGTGTGCTGGGGAGGCAAGATCTCGGAGATGCCCGGCTACGACTGGGTGGGGCTGT TTGTGGGATCCGAGGGCACCCTGGGCATTGCCACCGAGATTACCCTGCGCTTGCTCAAGGCCCCGGCTCAAGTGCAGGTT TTGCTGGCAGACTTTGACAGTGTGGAAGCGGCGGGATCCACCGTCTCCGACATCATTGCTGCCGGGATCATCCCCGCCGG CCTGGAGATTATGGACAACTTCAGCATCAATGCCGTGGAGGATGTGGTGCAGTTGGGCTACTATCCGCGGGATGCGGCGG CCATTTTGTTGGTGGAGGTGGATGGGCTGGAACTGGAGGTGGAAGAAGCCAGCCAACAGGTGAGGGCGCTGTGCTTCAAA AATGGGGCGCGACAGGTGCAAGTCGCATCCGACCCGGAAGAGCGGGCGCGGGTGTGGAAAGGACGTAAGGCAGCATTTGC CGCCATGGGCAAGCTCAGCCCCAACTACTATGTTCAGGATGGGGTGATCCCCCGCAGCCAGCTAGCCTTTGTCTTGAAGG AAATCGAGCGCCTCAGCCGTGAGTACGGTTATCCGGTGGCCAATGTGTTTCACGCTGGCGACGGCAATCTGCACCCCTTG ATCCTCTACGACGAGTCGGTGCCGGGATCCCTGGAGCAGGTGGAGAAACTGGGGGGCGAGATCCTTAAGCTCTGCGTGCG CTTGGGGGGCAGCATCTCCGGCGAACATGGCATCGGAGCAGACAAACGCTGCTACATGCCGGAAATGTTTACGCCTGCGG ATCTGGAGAGCATGCAATGGGTGCGGCAGGTGTTCGACCCCCAGCACATCGCCAACCCCGGCAAGATCTTTCCCACCCCC CGCACCTGCGGTGAGTCAGCCCACGCCCACAGCCAACCAGAATGGCAAGGGATCCCAGTCTTTTGA Protein sequence : MLRTASAKTSSHPLQTGLTFDWIRLTAELKKILDPQRVISKPEELLVYECDGLVSYRQRPALVVLPRTTEEVAQVVKLCS RYGVPFVARGSGTGLSGGALPVENSVVIATTLMKQILEIDLDNRCMVVQPGVINTWITQAVAAQGYFYAPDPSSQSVCSI GGNVAENSGGVHCLKYGVTANHILGLTVVLPDGEVVCWGGKISEMPGYDWVGLFVGSEGTLGIATEITLRLLKAPAQVQV LLADFDSVEAAGSTVSDIIAAGIIPAGLEIMDNFSINAVEDVVQLGYYPRDAAAILLVEVDGLELEVEEASQQVRALCFK NGARQVQVASDPEERARVWKGRKAAFAAMGKLSPNYYVQDGVIPRSQLAFVLKEIERLSREYGYPVANVFHAGDGNLHPL ILYDESVPGSLEQVEKLGGEILKLCVRLGGSISGEHGIGADKRCYMPEMFTPADLESMQWVRQVFDPQHIANPGKIFPTP RTCGESAHAHSQPEWQGIPVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-108 | 51 |
