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Name : rnhA (RPB_1342) Accession : YP_484963.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1528662 - 1529147 bp Length : 486 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGAGCGGGGCTCTGAGCGAAGCCGGGGCCGGCCCCCGCCCGGTGGTGATCCACACCGACGGTGCCTGTTCGGGCAACCC CGGCCCCGGGGGGTGGGGGGCCATCCTCAAATTCGGCGACACCGAAAAAGAACTCAAAGGCGGCGAAGCCCATACCACGA ACAATCGGATGGAATTGCTCGCGGCGATCTCGGCGCTGGAAGCGCTGACGCGGCCGTGCACGGTCGATCTCTACACCGAC AGCCAGTACGTCAAGAACGGCATCGGCAGCTGGATCCACAACTGGAAGCGCAACGGCTGGAAGACCGCCGACAAGAAGCC GGTGAAGAACGTCGATCTGTGGCAGCGCCTCGACGCCGCACTGAAGAGCCATCAGGTGCGCTGGCACTGGGTCAAGGGCC ACGCCGGCCACGACGAAAACGAACGCGCCGATCAGTTGGCCCGGGACGGGCTCACCGAGAATCGGATGAAATCGCGGATT GGTTGA Protein sequence : MSGALSEAGAGPRPVVIHTDGACSGNPGPGGWGAILKFGDTEKELKGGEAHTTNNRMELLAAISALEALTRPCTVDLYTD SQYVKNGIGSWIHNWKRNGWKTADKKPVKNVDLWQRLDAALKSHQVRWHWVKGHAGHDENERADQLARDGLTENRMKSRI G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-35 | 62 |
