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Name : RPB_3448 (RPB_3448) Accession : YP_487055.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3953431 - 3955413 bp Length : 1983 bp Strand : - Note : - DNA sequence : ATGATCGCCGAGGCCGGCCACTACGCGCTGGTGCTGGCGCTGGCGCTGGCGCTGATCCAGTCGACGGTGCCGATCCTCGG CGCGCGGCTGGGCGACGGCGGGCTGATGAACGTCGCGCGCTCGGCGGCGCTGGCGCAATTCGTCTTCGTCGCCGTCTCGT TCGGCGCGCTGGTCTGGCTCAACGTCACCTCCGACTTCTCGGTCGTCAACGTCTACGAGAATTCGCATTCGGCCAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGGAACCACGAAGGTTCGATGCTGCTGTGGGTGGCGATCCTGGCGCTGTTCGG CGGCATGGTCGCAGCGTTCGGCAACAACCTGCCGCTGTCGCTGCGCGCCCACGTGCTAGCGGTGCAGGCCTGGGTGGCGA GCGCGTTCTATCTGTTCATCCTGATCACCTCGAACCCGTTCCTGCGGATTCCCAATCCGCCGCTCGAGGGTCGCGACCTC AATCCGGTACTGCAGGACATCGGCCTCGCGGTGCATCCGCCGCTGCTGTATCTCGGCTATGTCGGCTTCTCGATCTCGTT CTCCTTCGCCGCCGCGGCGCTGATCGAGGGGCGGCTCGACGCGGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATGG CGTGGATCTTCCTGACGCTGGGCATCGCGATGGGCTCGTACTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGCTGATGCCGTGGCTCGCCGGCACCGCGCTGCTGCATTCGGCGCTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCAGGCGTCTTGACCTCGGTGCACACCTTCGCCACCGATCCGTCGCGCGGCGTGTTCATCCTGATGATCCTGTGCATC TTCATCGGCGGCAGCCTGGCGCTGTTTGCCTGGCGCGCCTCGGCGCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG CGAGGGCGCGCTGGTGCTGAACAATCTGTTTCTCACCACCGCCTGCGCCACGGTGTTCGTCGGCACGCTGTATCCGCTGG CGCTGGAAGTTCTCACCGGCGACAAGATCTCGGTCGGCGCGCCGTTCTTCAATCTCACCTTCGGTCCGCTGATGGTGCCG CTGATGCTGGCGATGCCGTTCGGCCCGCTGCTGGCGTGGAAGCGCGGCGATCTGCTCGGTGCCGCCCAGCGGCTGATCGC CGCCGGCGTCGTCGCGCTGCTCGCGGTCGCCCTGGTCTGGGCCTGGACGTTCGGCGGCCCGGTGCTGGCGCCGCTGGCGA TCGGGCTCGCGGTGTTCGTGATTGCCGGCGCGCTCGCCGACATCGTCGAGCGCATCGGCCTGCTGCGCAATCCGTTGTCG ATTGCGGCGCGCCGCGCCCGAGGGCTGCCGCGCTCGGCGTGGGGCACGCTGTTCGCTCATGCCGGCATCGGCGTGGCGCT GATCGGCATCGTCTGCGAGACCACCTGGAACAGCGAGCACATCGCCGCGATGAAGGAGGGCGAGTCCGCCAAGCTCGCCG GCTACGAACTCAAATTCGACGGCGCGATTCAGCGCCAGGGCCCGAACTATCGCGAGTTGCAGACGCATTTCTCGGTCAGC GAGAACGGCCGGCCGATCGGCGCGATGACGCCGTCGAAGCGCAGCTTCACCACCCGCAACACGTCGACCACCGAGGCTGC GCTGCTGACCCGCGGCGTCAGCCAGCTCTACATCTCGCTCGGCGACATCGACGCCGCCGGCGCGGTGACGGTGCGGATCT ATCACAAGCCCTTGGTGCTGCTGATCTGGATCGGTCCGCTGCTGATGGCGTTCGGCGGCCTGTTGTCACTGTCGGATCGG CGGCTGCGCGTCGGCGCGCCGAAGCCGGCCAAGCCGCAGCGCTTGCTGCAGCCGGCGGAGTAA Protein sequence : MIAEAGHYALVLALALALIQSTVPILGARLGDGGLMNVARSAALAQFVFVAVSFGALVWLNVTSDFSVVNVYENSHSAKP LLYKITGVWGNHEGSMLLWVAILALFGGMVAAFGNNLPLSLRAHVLAVQAWVASAFYLFILITSNPFLRIPNPPLEGRDL NPVLQDIGLAVHPPLLYLGYVGFSISFSFAAAALIEGRLDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHTFATDPSRGVFILMILCI FIGGSLALFAWRASALKQGGLFAPISREGALVLNNLFLTTACATVFVGTLYPLALEVLTGDKISVGAPFFNLTFGPLMVP LMLAMPFGPLLAWKRGDLLGAAQRLIAAGVVALLAVALVWAWTFGGPVLAPLAIGLAVFVIAGALADIVERIGLLRNPLS IAARRARGLPRSAWGTLFAHAGIGVALIGIVCETTWNSEHIAAMKEGESAKLAGYELKFDGAIQRQGPNYRELQTHFSVS ENGRPIGAMTPSKRSFTTRNTSTTEAALLTRGVSQLYISLGDIDAAGAVTVRIYHKPLVLLIWIGPLLMAFGGLLSLSDR RLRVGAPKPAKPQRLLQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-105 | 47 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-87 | 46 |
