Gene Information

Name : cspF (Y75_p1534)
Accession : YP_489822.1
Strain : Escherichia coli K-12
Genome accession: NC_007779
Putative virulence/resistance : Unknown
Product : cold shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643569 - 1643781 bp
Length : 213 bp
Strand : +
Note : ECK1552:JW1550:b1558; Qin prophage region

DNA sequence :
TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCG
TATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTT
GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA

Protein sequence :
MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-21 75
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-06 45