|
Name : Saro_0885 (Saro_0885) Accession : YP_496164.1 Strain : Novosphingobium aromaticivorans DSM 12444 Genome accession: NC_007794 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : 2.3.3.9 Position : 939719 - 941863 bp Length : 2145 bp Strand : + Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA DNA sequence : ATGGACATGGGTGAAATGAACGGACGTATCGAGCGCAGCGGGCTTCAGGTCGACGCGAAGCTGGCCACTTTCATCGACGG CGAGGTTCTCGGCCCGCTCGGCATTCAGGCCGACGCATTCTGGCAGGGCTTCGCGGCGCTTGTCGGCCACTTTACCCCGG TAAACCGCCAGCTTCTGGTGAAGCGCGATTCCCTCCAGGCGCTGATCGATTCCTGGCACCGCGAGCGTCGGGGCAAGCCC ATCCACGCGCACGAGTACCGCGCCTTCCTGAGCGAGATCGGCTATCTCGTGCCCGAGCCGGACGACTTCCTGATCGGAAC CGAAAACGTCGACCGAGAGATCGCGTCGATGGCGGGGCCGCAGCTCGTCGTGCCGGTCCTCAACGACCGGTTTGTCCTTA ATGCCGCGAACGCGCGCTGGGGCAGCCTGTATGACGCATGGTATGGCACCGACGCGCTCGATGCGCCGCCGGCCCGTCCG GGTGGTTACGACAAGGAACGCGGGGCCGCGGTCGTCGCCGCCGGACGCGCATTCCTCGACCTGACGTTCCCTCTCGACAG CGCGAGCTGGTCCGACTGGGATGGCGAAGGCGTGCCGCCGCTGTGCGACGCGGACCAGTTCGCCGGGACGAAGCCCGGGG GCATCCTGCTTTGCAACAATGGCCTGCACGTCGAGATCGTGCTCGACCGCGCGCACCCGGTCGGCGCAGACGACAAGGCG GGCATTGCCGACATCGTGATGGAAGCGGCGCTGACGACCATCGTCGATCTCGAGGATTCGGTTGCGGCGGTCGACGCCGA GGACAAGCTGCTGGCCTATCGCAACTGGCTGGGCCTGATGCGCGGCGACCTGGAGGCGAGCTTCCAGAAGGGCGGCAGGA CGCTGACCCGCGCGCTGGAGGCTGACCGCGAGTGGACTTCGGCCAAGGGCGAGCCGCTGACCCTGCCGGGGCGCAGCCTG CTGTTCGTGCGCAACGTCGGACACCTGATGACCAACCCTGCGATCCTGCTTCCCGATGGCAGCGAGATTCCCGAAGGGAT CATGGATGCGGTTGTGACTTCGGCCATCGCGATGCACGACATCAGGGGGCTGGGCCGCCATCGCAACAGCCGCGCGGGCA GCATCTATATCGTGAAGCCCAAGATGCACGGGCCGGAAGAGGTCGGCTTCACCAACGATCTGTTCAACGCGGTCGAGGAC CTGCTCGGGCTGGATCGCCACACGGTCAAGGTCGGGGTGATGGACGAGGAGCGCCGCACTTCGGCCAACCTCGCCGCGTG CATCCGCGCGGTGAAGGACCGTATCGTCTTCATCAACACCGGCTTCCTCGACCGTACCGGCGACGAGATCCACACCTCGA TGCAGGCGGGGCCGATGATCCGCAAGGGTGCGATCAAGGGGTCGGGCTGGATCGCCGCCTACGAGAAGCGCAACGTCTGC ATCGGCCTTGCGCACGGGCTTTCCGGCAAGGCGCAGATCGGCAAGGGCATGTGGGCCGCGCCCGACATGATGCACGACAT GATGCAGCAGAAGATCGCGCACCCGAAGACCGGCGCGAACACCGCCTGGGTGCCTTCGCCCACGGCAGCCACGCTGCATG CCATGCACTACCACCAGGTCGCGGTGTTCGACGTGCAGCGCGAAGTGGCGCAGGAGAAGACGCCGGGGCTCGACGCGCTG CTCGCGATTCCGCTGGCGGAGGGGACCAACTGGTCGGCCGAGGAAGTGCGCGAGGAGCTGGACAACAACGCGCAAGGCCT GCTCGGCTATGTCGTGCGCTGGATCGACCAGGGCGTCGGCTGTTCGAAGGTGCCCGACATCAACGACGTCGGCCTGATGG AAGACCGCGCGACGCTGCGCATTTCCAGCCAGCACATGGCCAACTGGTTGCTGCACGGCGTGGCCACCGGTGAGCAGGTG ATGGACAGCCTCAAACGCATGGCGGCCAAGGTCGATGCGCAGAACGCCGGCGATCCGCTCTATGAGCCGATGGCCGGACG CTGGGAGGAAAGCTTTGCCTTCCGCGCCGCCTGCGATCTCGTGTTCAACGGGGTGGAACAGCCCAACGGCTATACCGAGC CGCTGCTGCACGCGTGGCGCCTGAAGAAGAAGGCGGCGGTGGGGAAGGTGGCCGAACCGGCCTGA Protein sequence : MDMGEMNGRIERSGLQVDAKLATFIDGEVLGPLGIQADAFWQGFAALVGHFTPVNRQLLVKRDSLQALIDSWHRERRGKP IHAHEYRAFLSEIGYLVPEPDDFLIGTENVDREIASMAGPQLVVPVLNDRFVLNAANARWGSLYDAWYGTDALDAPPARP GGYDKERGAAVVAAGRAFLDLTFPLDSASWSDWDGEGVPPLCDADQFAGTKPGGILLCNNGLHVEIVLDRAHPVGADDKA GIADIVMEAALTTIVDLEDSVAAVDAEDKLLAYRNWLGLMRGDLEASFQKGGRTLTRALEADREWTSAKGEPLTLPGRSL LFVRNVGHLMTNPAILLPDGSEIPEGIMDAVVTSAIAMHDIRGLGRHRNSRAGSIYIVKPKMHGPEEVGFTNDLFNAVED LLGLDRHTVKVGVMDEERRTSANLAACIRAVKDRIVFINTGFLDRTGDEIHTSMQAGPMIRKGAIKGSGWIAAYEKRNVC IGLAHGLSGKAQIGKGMWAAPDMMHDMMQQKIAHPKTGANTAWVPSPTAATLHAMHYHQVAVFDVQREVAQEKTPGLDAL LAIPLAEGTNWSAEEVREELDNNAQGLLGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQHMANWLLHGVATGEQV MDSLKRMAAKVDAQNAGDPLYEPMAGRWEESFAFRAACDLVFNGVEQPNGYTEPLLHAWRLKKKAAVGKVAEPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 0.0 | 56 |
