Gene Information

Name : rnhA (APH_0109)
Accession : YP_504737.1
Strain : Anaplasma phagocytophilum HZ
Genome accession: NC_007797
Putative virulence/resistance : Unknown
Product : ribonuclease H1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 114020 - 114472 bp
Length : 453 bp
Strand : +
Note : identified by similarity to SP:P00647; match to protein family HMM PF00075

DNA sequence :
ATGGATAGTGGGCAGGTTGTCATATACACTGATGGAGCTTGTTCTGGTAATCCTGGCCCTGGCGGCTGGGGTGCGGTCTT
TCTTTTTTCGGGTGGTGAGGAGCGTAGGATATCAGGTGGTTGTAGCGATACAACAAACAACAGGATGGAGCTTTCTGCAG
TGATAGAAGCTTTAGGTGCTTTAGATAGGCAATGTAACGTTTGTGTGCGTACGGATAGTGTCTATGTGAAGAATGGTATT
ACTACGTGGATACACAAGTGGAAGTCAAATGGCTGGCAAACTGCGAGTAAGTCTGCTGTAAAAAATGTAGATTTGTGGAT
GCAGCTTGAGGCACTGACGCTGAAGCATAATGTGACGTGGGAATGGGTTAAGGCTCATGCAGGTAACAGGTATAATGTTG
AGGCTGATGCACTGGCAAGAGCTGAAGTAGAGCGCCAAGTTATGAAGCGTTGA

Protein sequence :
MDSGQVVIYTDGACSGNPGPGGWGAVFLFSGGEERRISGGCSDTTNNRMELSAVIEALGALDRQCNVCVRTDSVYVKNGI
TTWIHKWKSNGWQTASKSAVKNVDLWMQLEALTLKHNVTWEWVKAHAGNRYNVEADALARAEVERQVMKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-30 50