Gene Information

Name : Rfer_2425 (Rfer_2425)
Accession : YP_523673.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2674691 - 2675377 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATTCAATTATTTCTGTTGAACACGTGTTCAAGTCGGTCACCGATTCCACCGGCACGCTCGACATTTTGCGCGA
TATTGATTTTGCGTTGAATGCCAGGGAAACAGTCGCCATTGTCGGGGCTTCGGGTTCCGGCAAAAGCACGCTGTTGTCGA
TCATTGCGGGTTTGGACACACCCAGCCGTGGCACCGTCCGGCTGGGCGGGCAGGACTTGTTCGCCCTCAATGAAGACGAG
CGCGCGGCCGTGCGGGCCCAAAAAGTCGGTTTTGTGTTTCAGAGTTTTCAATTGCTGGGCAATCTCACAGCGCTGGAGAA
CGTGATGCTGCCACTGGAACTGGCTGGCAGGCGCGATGCCCGACAGGCCGCGACCGACATGCTGGCGCGCGTGGGCCTGT
CCGAGCGCCTGGGCCATTACCCCAAGGTGCTCAGTGGCGGCGAGCAACAGCGGGTGGCGCTGGCGCGCGCCTTTGTCGTC
AAACCGGCGCTGCTGCTGGCCGATGAACCCACCGGCAGCCTGGACTTTGCCACCGGTGAAAAAGTGATGGAGCTGATGTT
TGACCTGAACCGCGAACTCGGCACCACGCTGGTGCTGGTCACCCACGACCGCGCCATTGCCTCGCGTTGCGCGCGCTGCA
TCACGATTGAGGCGGGGCGGGTGATGGAGACGGCGTTTGAGGTTTAA

Protein sequence : 
MSDSIISVEHVFKSVTDSTGTLDILRDIDFALNARETVAIVGASGSGKSTLLSIIAGLDTPSRGTVRLGGQDLFALNEDE
RAAVRAQKVGFVFQSFQLLGNLTALENVMLPLELAGRRDARQAATDMLARVGLSERLGHYPKVLSGGEQQRVALARAFVV
KPALLLADEPTGSLDFATGEKVMELMFDLNRELGTTLVLVTHDRAIASRCARCITIEAGRVMETAFEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_2425 YP_523673.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-34 50
Rfer_2425 YP_523673.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-42 48
Rfer_2425 YP_523673.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_2425 YP_523673.1 ABC transporter-like protein VFG2059 Protein 3e-15 43