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Name : Rfer_0040 (Rfer_0040) Accession : YP_521333.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 43735 - 45708 bp Length : 1974 bp Strand : - Note : - DNA sequence : ATGATTCCTGAAATTGGTCATTTTTCGCTCATTCTTGCCCTTTTTGTGGCGCTGGCCCTGGGTACTTTAAGCGTCGTGGG TGGACAGCAGGGGCGCGCCGACTGGATGGCAATGGCACGCCCCGGTGCACAAGCGCTGTGGTTGCTGACGGCACTCTCCT TTGGCTGTCTGACCTATGCTTTTTTTACCAATGACTTTTCCGTCTCTTACGTCGCGCAGCATTCCAACACCAAACTGCCC GATATCTACCGCATTGCCGGCGTTTGGGGTGGGCACGAGGGCTCGCTGCTGCTGTGGCTGATGATGTTGTGCACCTGGAT GATGGCGGTGTCGCTTTTTTCCCGCCAGTTGCCCGAGGTGATGGTATCGAGAGTGCTGGGTGTTTTGGCTCTGGTGGCGG TTGGTTTCCTGCTGTTCATGTTGATCACCTCCAATCCGTTTCTGCGCCTGAGCGACATTCCGGCCGATGGGCGCGATTTG AATCCGCTGCTGCAAGACCCGGGCCTGGTGTTTCACCCGCCCATGCTGTACATGGGTTACGTCGGTATGTCGGTACCGTT TGCTTTTGCCATCGCCGCACTGCTCAACGGCCGGCTTGACGCCGCTTGGGCGCGCTGGTCGCGGCCCTGGGCCACTGCGG CCTGGATTTGCCTGACGATCGGCATTGCGATGGGTTCCTGGTGGGCGTATTACGAACTGGGCTGGGGTGGCTGGTGGTTT TGGGACCCGGTCGAAAACGCATCCTTCCTGCCCTGGCTGGTCGGCACCGCGCTGATCCATTCCTTGGCCGTGACAGAAAA GCGTGGACTTTTTCGCAACTGGACCATCATCCTGGCCATCACGGCGTTCTCCCTCAGCCTGCTGGGAACGTTCCTGGTCC GCTCCGGTGTGTTGACCTCAGTCCACGCCTTTGCGACCGACCCCAAGCGCGGCGTGTTCATCCTGCTCTTCTTGTCCGTT GTGGTCGGTGGTTCACTCACCTTGTTTGCCATGCGCGCCAGCAAAGTCCGCGCTGGCGGCGCTTTTGCACTGGTGTCGCG CGAGACTTTTCTGCTGGTTAACAACGTCTTGCTCACCACCGCCGCGGCAGCGGTGTTGCTGGGAACCTTGTATCCGCTGA TTGTGGACGCGCTCAACCTGGGCAAGCTGTCGGTCGGGCCACCGTACTTCAACTCGGTGTTTGCACCCATCATGCTGCCG GTATTGTTTTTTATGGTGCTGGGTTCGTTTGCGCGCTGGAAAAATGACAGCGTGGCGGAACTCACGAAAAAGCTGCGCCC GGTGGCCATTCTCTCGGTGCTCCTGGGCTGCAGCGCCCCGTTTCTTGCCGGCGAGTGGTCGCCTTTGGTGGCGCTCAGTT TGACGCTGGTGTTCTGGATTGTGCTGGCATCGATACAACAAATTTACCGTCAGCTCAAGGACACCGTCAACTGGAGATCC ACCCCGATATCGTTCTGGGGCATGCATGTGGCGCACATTGGCATTGCCGTTTTTGTGGTCGGTGTCACCATGGTCAAGGC TTATGAGAACGAAAAAGACGTGCGCATGGTGGTGGGCGACACGGTGGAAGTGGCTGATTACACCTTCCGCCTGACGGGTA TTCGTGAGGTGCCGGGTCCCAATTACACCGCCGACCAGGGTGATGTGGAAGTGCTCCGTGGCGGCAAGCTGCTCAAAACC CTGCATCCCGAGAAGCGCACTTATTTCTCATCCACCATGCCGATGACGGAGACCGCGATTGACAGCAATTTGCTGCGCGA TGTCTATGTATCGCTGGGTGAGCGTCTTGAAGGCGGCGACAAACCGGCCTGGGCGATGCGGGTCTACCACAAGCCCTTTA TCGTCTGGATCTGGCTCGGCAGCCTGATGATGGCCTTGGGCGGCGGCATGGCCGCGTTGGACCGCCGTTATCGCCGCAAA GTGACCGCCAGCGCGGGCGCCGTCAATCCAAAAATCAAGGGCGTTGCAGCATGA Protein sequence : MIPEIGHFSLILALFVALALGTLSVVGGQQGRADWMAMARPGAQALWLLTALSFGCLTYAFFTNDFSVSYVAQHSNTKLP DIYRIAGVWGGHEGSLLLWLMMLCTWMMAVSLFSRQLPEVMVSRVLGVLALVAVGFLLFMLITSNPFLRLSDIPADGRDL NPLLQDPGLVFHPPMLYMGYVGMSVPFAFAIAALLNGRLDAAWARWSRPWATAAWICLTIGIAMGSWWAYYELGWGGWWF WDPVENASFLPWLVGTALIHSLAVTEKRGLFRNWTIILAITAFSLSLLGTFLVRSGVLTSVHAFATDPKRGVFILLFLSV VVGGSLTLFAMRASKVRAGGAFALVSRETFLLVNNVLLTTAAAAVLLGTLYPLIVDALNLGKLSVGPPYFNSVFAPIMLP VLFFMVLGSFARWKNDSVAELTKKLRPVAILSVLLGCSAPFLAGEWSPLVALSLTLVFWIVLASIQQIYRQLKDTVNWRS TPISFWGMHVAHIGIAVFVVGVTMVKAYENEKDVRMVVGDTVEVADYTFRLTGIREVPGPNYTADQGDVEVLRGGKLLKT LHPEKRTYFSSTMPMTETAIDSNLLRDVYVSLGERLEGGDKPAWAMRVYHKPFIVWIWLGSLMMALGGGMAALDRRYRRK VTASAGAVNPKIKGVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-152 | 63 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-112 | 53 |
