Gene Information

Name : Sde_R0013 (Sde_R0013)
Accession : -
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1409844 - 1411338 bp
Length : 1495 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGAGAAAGCCTTCGGGTGAGT
ATAGCGGCGGACGGGTGAGTAACGCGTGGGAATCTACCCAGTAGTGGGGGACAACAGTTGGAAACGACTGCTAATACCGC
ATACGTCCTATGGGAGAAAGGTGGCCTCTATTTATAAGCTATCGCTACTGGATGAGCCCGCGTCGGATTAGCTAGTAGGT
GGGGTAATGGCCCACCTAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCA
GACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAG
GCTTTCGGGTTGTAAAGCACTTTCAGTAGGGAGGAAAGGTTAGTAGTTAATACCTGCTAGCTGTGACGTTACCTACAGAA
GAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGC
GCGCGTAGGCGGTTAGCTAAGCTAGATGTGAAAGCCCAGGGCTTAACCTTGGAACTGCATTTAGAACTGGTTGACTAGAG
TATGGTAGAGGGGTGTGGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAACATCAGTGGCGAAGGCGACA
CCCTGGACCAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAA
CGATGTCTACTAGCCGTTGGGGTCCTTGAGGCCTTAGTGGCGCAGCTAACGCACTAAGTAGACCGCCTGGGGAGTACGGC
CGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAG
AACCTTACCAGGTCTTGACATCCAGAGAACTTACTAGAAATAGTTTGGTGCCTTCGGGAACTCTGAGACAGGTGCTGCAT
GGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTTGCTAGCAGGT
AATGCTGAGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACG
ACCTGGGCTACACACGTGCTACAATGGTCAGTACAAAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACTGAT
CGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGAATCAGAATGTCACGGTGAA
TACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACCTTCGGG
GGGACGGTTACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCC

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-162 89.1
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-162 88.8
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-162 88.8
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-162 88.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-162 88.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-162 88.7