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Name : Sde_1407 (Sde_1407) Accession : YP_526881.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1823239 - 1825107 bp Length : 1869 bp Strand : + Note : - DNA sequence : ATGAATCGCTACCCGCTTTGGAAATATTTGCTCATCCTAGCTGTCGTGGTTATTGGGTTTCTCTATTCGTTGCCTAATAT TTACGTTCCCGACCCCGCTATACAAATTTCCGGTATCCGCTCTGGTGTAGAGGTAGATGCTAACGCACTCAATACTGCTA CCAAAGCGCTTGAAGAAAACGGCATTCAGTATTTTGGCGCCGAAGCCGGCGAAAAATCTGCACTTATTCGCTTTGCTACG CAAGATGATCAGCTTCGCGCGCGTACCATTGTGCAGCGTGCTTTAAGCCAAGAAAACTACGTAGTGGCCTTTAACCTAGC GCCAACCACACCGCAATGGCTGGTTGACTTGGGCGCAGGCCCAATGAGTTTGGGCTTGGATTTGGCGGGCGGTGTGCATT TCTTGTTAGAGGTGGATACAGAATCTGTATTAGCTAAAGAAATGGAAGGCTTCGAAGATGACATTAGCGGCTTAATACGC AAAGAAAAATTGTACGGTGTAAGTACTCGTTTAACCGATGGTGAGATTGTAATTACTGCCGATTCAGATGATTTACGTAC AGATGTACTCTTGCTGCTGAAAAAAGAATTAAGTGAATTAGAAACGAAAAGAACAGAAAGGGGCGGCAAGTATATTGTTA CTGCTGTTCCGAGTGACGCTTACATTCGCGAAAAAGAAAAGCACGCAGTGCAGCAAAACTTAACCACGTTGCGTAACCGT GTGAACGAAATTGGTGTTTCTGAGCCGCTGGTGCAAACGCAAGGTCGCAACCGTATTGTGGTGCAGTTGCCAGGTATTCA AGATACCGCACGCGCTAAAAAGATCTTAGGCAAAACCGCTAACCTAGAATTTCGCTTAGAGGCACCTAAAGATGGTTTAG CTTCGCAAAAAGAGCATTTTGAGTTTCGCGATGAGATAAAACAAGCGCGATATGGTGGTGCTTGGTTAGAAAAGCGCCCG TTTGTAACTGGGCAAAACGTAACTGGCGCAACCCCAGGGTTTGATGATCAATCAAACTCGCCCATGGTGAGCATATCGCT AGACAGCAAGGGTGCAGGATTAATGCACCGTAAAACCCGTAAGCACGTAAATGAGAGTATGGCGATTGTATTAATTGAAT ACGATACCAAAGTACGAGAAGAAGTTAACGAAGCGGGTGAAACTGTAATTGTTACAGAGCAAGTACCCAACCCTAAAATG GTTAGCTTGGCGAATATTAACGAAGCGCTGAGCAAGCGATTCCAAATTACCGGTTTAGATTCACCAGAAGAAGCATCGGA ATTGGCGTTGTATATTCGCGCTGGTGCGTTGGCTGCCCCTATGTCATTCGTAGAAGAGCGCACCATTGGCGCTTCGTTGG GGCAAGAGAATATCGACCTGGGTGTTAAATCGGTACAGCTAGGTTTGGTGCTAGTGCTTATCTTTATGATGGTGTTCTAC AAAGTGTTTGGCTTTTTTGCCAACTTGGCGCTTGCGGTTAACTTAATGGTGCTTGTGGCCGTTATGTCTATGTTTGGCGC TACGCTTACCTTGCCTGGTATTGCCGGTATTGTGCTTACTGTAGGTATGGCGGTGGATGCAAACGTGCTTATTTTCTCGC GAATAAAAGAGGAGCTTAAAGCAGGTTCTTCGTCGCAAACGGCCATTAACAGCGGTTACGATTCTGCATTTTCAACCATT TTGGATGCGAACTTAACAACATTCATTGTTGCCATTATTTTGTACGCCATTGGTTCTGGGCCGGTTAAAGGTTTCGCGGT TACTTTAGCTATAGGTATTATCACTTCCATGTTTACTGCCATTGTGGGCACGCGCGCGCTAGTTAATTTAGCGTTTGGCG GTCGCAATGTTAAAAAACTCTGGATATAA Protein sequence : MNRYPLWKYLLILAVVVIGFLYSLPNIYVPDPAIQISGIRSGVEVDANALNTATKALEENGIQYFGAEAGEKSALIRFAT QDDQLRARTIVQRALSQENYVVAFNLAPTTPQWLVDLGAGPMSLGLDLAGGVHFLLEVDTESVLAKEMEGFEDDISGLIR KEKLYGVSTRLTDGEIVITADSDDLRTDVLLLLKKELSELETKRTERGGKYIVTAVPSDAYIREKEKHAVQQNLTTLRNR VNEIGVSEPLVQTQGRNRIVVQLPGIQDTARAKKILGKTANLEFRLEAPKDGLASQKEHFEFRDEIKQARYGGAWLEKRP FVTGQNVTGATPGFDDQSNSPMVSISLDSKGAGLMHRKTRKHVNESMAIVLIEYDTKVREEVNEAGETVIVTEQVPNPKM VSLANINEALSKRFQITGLDSPEEASELALYIRAGALAAPMSFVEERTIGASLGQENIDLGVKSVQLGLVLVLIFMMVFY KVFGFFANLALAVNLMVLVAVMSMFGATLTLPGIAGIVLTVGMAVDANVLIFSRIKEELKAGSSSQTAINSGYDSAFSTI LDANLTTFIVAIILYAIGSGPVKGFAVTLAIGIITSMFTAIVGTRALVNLAFGGRNVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-125 | 51 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 51 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 51 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 51 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-126 | 51 |
