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Name : Sde_1411 (Sde_1411) Accession : YP_526885.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Unknown Product : RNA methyltransferase TrmH, group 1 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1829753 - 1830556 bp Length : 804 bp Strand : + Note : - DNA sequence : ATGGCAGAGCACGACAATTTCAATCGCATTCGAATCGTAATGGTAAACACTACACACCCCGGTAATATTGGCGGCGCCGC GCGAGCTATGAAAAACATGGGGCTGGGTAAACTGTATTTGGTAGACCCTAAGCAATACCCCGCGGAAAAGGCAGTATGGC GCGCTGCGAGTGCAACGGATGTGCTAGATGATGCAGTGGTGGTGGGTAGCCTAGATGAAGCGATAGCTGATTGCACCTTG GTTGTTGGCACCAGCGCGCGTGAGCGCAGAATTCCTTGGCCATTGCTTACCCCGCGGGAGTGTGGCGATAAAGCTTGGGC AGAGGCCGGTAAGGGCGAAGTGGCAATTGTGTTTGGTCGCGAAGACCGCGGGTTAACAAACGAAGAGCTGCAAAAGTGCC ATTATCACGTGCATATTCCGTCAAACCCAGATTACAGCTCGCTAAACATTGCGGCTGCTATTCAGGTGTTGTGCTACGAG ATTCGCATGACGCATTTGGCCGAAAAAGAGGGTAAGCCCATTCATTTTGACGATTGGGATGTGCCGCCTGCCAAGCAGCA AGATATGGAGTACTACTACGCGCACTTGGAGGAAACGTTGGCAAAGCTGGATTTCTTAGATCTATCCAACCCACGCCAAA CCGTTACCCGCATTCGACGTATGTTTAACCGTATACGTATGGATGAAATGGAAATTAGCATTCTGCGCGGTATGCTCACA TCTATTCAGAACCAGATTTACCATTCAGGTAACAAAATAGAGGCCCTAAATGAAGAGATTGCCAAATTAAAGGGTGAGAA GTAA Protein sequence : MAEHDNFNRIRIVMVNTTHPGNIGGAARAMKNMGLGKLYLVDPKQYPAEKAVWRAASATDVLDDAVVVGSLDEAIADCTL VVGTSARERRIPWPLLTPRECGDKAWAEAGKGEVAIVFGREDRGLTNEELQKCHYHVHIPSNPDYSSLNIAAAIQVLCYE IRMTHLAEKEGKPIHFDDWDVPPAKQQDMEYYYAHLEETLAKLDFLDLSNPRQTVTRIRRMFNRIRMDEMEISILRGMLT SIQNQIYHSGNKIEALNEEIAKLKGEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 6e-65 | 55 |
