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Name : Sde_2024 (Sde_2024) Accession : YP_527496.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Unknown Product : putative lytic murein transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1388 EC number : - Position : 2548465 - 2550096 bp Length : 1632 bp Strand : + Note : - DNA sequence : ATGCAAATTACGTTATTTTCTCGCACTTTTGCGCGAACCACTCCGCTAGTCGCACTATTAGGTGTATTAATTGGCTTTCA AGGATGCGCTTATACTAAAAACGAAGCCGAATCTGAGCTTGTTATCGTATCAACTCCAGAAGAGCAGCTAGAAGCTGATA TTGCTGAGCACTCGCTCGATGCTGAACCATTAGACGTCCCCGAAGCCGACGAGCCAATTGTAGAGTCAGAATTTACCCTT TGGGATCGAATCCGAGCTGGCTACCAACTAGAAATCCCCCAAGACAAAAGAATCGACCAAGAACGTAATTGGTATGGCAA ACACCAAAGCTACCTAGATAGAGTCACCGATCGCGGTGAGCGTTACCTCTACTATATTGTTGGCGAATTAGAACGCCGCA ACATGCCTACGGAATTTGCTTTGCTTCCTATAGTAGAAAGCGCATTTGACCCCTTTGCCTATTCCCATGTAACGGCTTCT GGCATGTGGCAGTTTATGCCCCGCACAGGGCGAAGCTTGGGCTTAAAGCAAAACTGGTGGTATGACGGTCGCAGAGACGT GGTTTTATCTACCAATGCAGCGCTCACCTACCTAGAAAAACTACATAAGCATTTTGATGGCGACTGGCTGCTGGCAATGG CAGCGTATAATAGCGGTATTGGTAATGTTTCTCGGGCAATTAAACGCAATGAAAAAGCCGGTAAACCCACCGATTTTTGG AACCTAAAACTCCCCAGAGAAACTCAAGCATACGTACCTCGGCTACTGGCTATTAGCCAGCTAATTGGCGCACCAGAAGA TTACGGCTTAACACTGCGCCCAATTCCCAACCAACCGTATTTCGAAGCCGTTGAAGTGGGGTCGCAAATAGATTTGGCTC AAGCGGCAGAGCTTGCCGAAATAGATATGGATGAGCTATATCAACTTAATCCTGCCTTTAATCGCTGGGCGACAGACCCT ACCGGCCCGCACACTTTATTGGTGCCTTACGCCTCAGCGAACTCATTCAAAGAAAAGCTAGCCGGCATTCCGCCTGGCAA ACGAATCACATGGGATAGATACACTATCGCGTCCGGTGATTCCCTCTCTACTATCGCTGCAAAATACAAAGTAAGCGTAG ATTCACTAAAAAGCATAAATGGTTTGCGAAATAACAACATTCGCGCGGGAAAGACTCTATTGGTGCCTATTGCTGCTAAA AAAGACGAGCACTACACACAAAGCATTGTGCAACGCATCCAAAACAGACAATCCTCAGGCGGTAAAAGCGGCAACTCAAC CAAAGTTGAGCATATAGTACAAAGCGGCGACAGCTTCTGGTCTATTGGTAAAAAATACGGTGTTACCCCAAGCAAAGTTG CACATTGGAACAACCTTGCCCCAGCGGACCTTATCAAACCGGGCCAAACTCTCGTTATTTGGACCAAGGCCGAAGCTAGC ACTGCGTCCAACAACGCTGTTGTTAGAAAGCTCTCGTACAAGGTAAGGCGCGGAGATTCCCTGCATCGTATAGCTGACAA ATTCAAAATAAACGTGAGCGACATATTGCAGTGGAATCAAGTCGACACCAAGAGCTATTTACAGCCAGGTGATACGCTAA CACTTTTTGTGGATGTGACTAAAACTAACTAG Protein sequence : MQITLFSRTFARTTPLVALLGVLIGFQGCAYTKNEAESELVIVSTPEEQLEADIAEHSLDAEPLDVPEADEPIVESEFTL WDRIRAGYQLEIPQDKRIDQERNWYGKHQSYLDRVTDRGERYLYYIVGELERRNMPTEFALLPIVESAFDPFAYSHVTAS GMWQFMPRTGRSLGLKQNWWYDGRRDVVLSTNAALTYLEKLHKHFDGDWLLAMAAYNSGIGNVSRAIKRNEKAGKPTDFW NLKLPRETQAYVPRLLAISQLIGAPEDYGLTLRPIPNQPYFEAVEVGSQIDLAQAAELAEIDMDELYQLNPAFNRWATDP TGPHTLLVPYASANSFKEKLAGIPPGKRITWDRYTIASGDSLSTIAAKYKVSVDSLKSINGLRNNNIRAGKTLLVPIAAK KDEHYTQSIVQRIQNRQSSGGKSGNSTKVEHIVQSGDSFWSIGKKYGVTPSKVAHWNNLAPADLIKPGQTLVIWTKAEAS TASNNAVVRKLSYKVRRGDSLHRIADKFKINVSDILQWNQVDTKSYLQPGDTLTLFVDVTKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 3e-67 | 41 |
