|
Name : RPC_1047 (RPC_1047) Accession : YP_530930.1 Strain : Rhodopseudomonas palustris BisB18 Genome accession: NC_007925 Putative virulence/resistance : Unknown Product : major facilitator transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 1148930 - 1150285 bp Length : 1356 bp Strand : + Note : - DNA sequence : ATGCCTACCGATAACGAAAACGCAACAACACGCGGCCTCTCGCCGGCGGCCATGCGGAAAGTGGTCGCCGCGAGTTTCGC CGGCGCCCTGCTCGAATGGTATGATTTCTTCATCTTTGGGACCGCGGCGGGCCTCGTGTTCGGCAAGCTGTTCTTCCCGC AGTCGGATCCTGCGGTGGGGACGATCGCGGCGTTTGCCACCTTCGGTGTGGGCTTTCTCGCCCGGCCACTCGGCGGCGTG GTGTTCGGTCATTTCGGAGACCGGGTCGGGCGCAAGGCGACCTTGATCGCGACGCTGTTGATCACCGGCATATCGACTTT CCTCATCGGGTTTCTGCCGACGTTCGCCGATGTCGGGATCGCGGCGCCCATCATGTTGGTGGTGCTTCGGCTGATTCAGG GGTTTGGATTGGGCGGCGAGTACGGCGGCGCAGCCCTGATGACGATCGAATCCGCGCCGGAATCGCGTCGTGGTTTCTTC GGCTCCTTGCCGCAAATGGCGGCGTCCGCCGGAATCATGTTGGCGACGGGCGTGTTCGCCTTGTGCAGTTGGGGGCTTAC GGAAGCGCAGTTCTTGGATTGGGGCTGGCGCCTTCCCTTCCTGCTTTCGGCGGCAATGCTGATCGTGGGCATGCAGATCC GGCTACACATCGAGGAGACACTGGATTTCAAGGCCACGCGACGCCGCGAGCAGGCTAGCACCGAGAAGCGAGTGCTCCCG ATCGTCGAACTGCTACGCCGGCATCCCCGCAATATCGCGCTCGCGCTCGGCGCGCGCCTCGCCGAGACGGTGTCCTCGAA CATCGTCAATGCATTCGGCATTGCCTACGTCTCCACCAACCTGGCGATGGGGCGTCAGCTTCCGCTGATGGGCATGCTGA TGGCTTCGGCGATCGGCATCATGCTGTGCCCGCTGTTTGGCTGGCTCTCCGATCGGTACGGCCAACGCGTGGTCTACCTG TTCGGCGCACTGGCCTGCGCGGTTCTGATCGTGCCGTTCTTCGCGGCGCTCGCAACCGGAAATGGCGTGCTGATCTGCCT CGCCTTCATTGTCTTTTACAATTTGGGTCCCACGGCGATGTTCGCGGTGCAGCCCACGATGTTCTCGCGGATGTTCGGCA CCAGGGTTCGCTACACCGGCCTGTCGTTCGCCTATCAGTTCTCGGCGATGCTCGGCGGCCTCACGCCGCTGATTTCGGCG TCGCTGCTGACGCTCGGCCATGGCGACCCGTGGTGGGTGGCAGGCTATCTGATCGTCGTCTCGTTGATCTCCGCGACGTC GGTCTGGCTGATCAGCGAGGTTCGGCTGATTGAACTTCATGACTATGCGACGGCACTGCCGCGGGAGACGACATGA Protein sequence : MPTDNENATTRGLSPAAMRKVVAASFAGALLEWYDFFIFGTAAGLVFGKLFFPQSDPAVGTIAAFATFGVGFLARPLGGV VFGHFGDRVGRKATLIATLLITGISTFLIGFLPTFADVGIAAPIMLVVLRLIQGFGLGGEYGGAALMTIESAPESRRGFF GSLPQMAASAGIMLATGVFALCSWGLTEAQFLDWGWRLPFLLSAAMLIVGMQIRLHIEETLDFKATRRREQASTEKRVLP IVELLRRHPRNIALALGARLAETVSSNIVNAFGIAYVSTNLAMGRQLPLMGMLMASAIGIMLCPLFGWLSDRYGQRVVYL FGALACAVLIVPFFAALATGNGVLICLAFIVFYNLGPTAMFAVQPTMFSRMFGTRVRYTGLSFAYQFSAMLGGLTPLISA SLLTLGHGDPWWVAGYLIVVSLISATSVWLISEVRLIELHDYATALPRETT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-72 | 44 |
