Gene Information

Name : RPC_1168 (RPC_1168)
Accession : YP_531050.1
Strain : Rhodopseudomonas palustris BisB18
Genome accession: NC_007925
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1273687 - 1273968 bp
Length : 282 bp
Strand : +
Note : -

DNA sequence :
ATGATGAGTGGCGAAGCACTGGGAATGGTCGAAACCAAGGGTCTGATCGGGTCCATCGAAGCCGCGGACGCGATGACCAA
GTCCGCCAATGTGACCCTGATCGGTTACGAAAAGATCGGATCGGGCCTCGTGACCACGCTGGTCCGCGGCGATGTCGGCG
CGGTCAAGGCGGCGGTCGATGCCGGCGCCGCGGCGGCCGAGAAGGTCGGCACCGTGATCTCCAAGCACATCATTCCGCGG
CCGCATGCGGATGTCGAGAAGATCCTGCCGCATCTCGGCTAG

Protein sequence :
MMSGEALGMVETKGLIGSIEAADAMTKSANVTLIGYEKIGSGLVTTLVRGDVGAVKAAVDAGAAAAEKVGTVISKHIIPR
PHADVEKILPHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPC_1168 YP_531050.1 microcompartments protein VFG1596 Protein 2e-16 64
RPC_1168 YP_531050.1 microcompartments protein VFG1597 Protein 1e-16 63
RPC_1168 YP_531050.1 microcompartments protein VFG1598 Protein 5e-15 63