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Name : RPC_1836 (RPC_1836) Accession : YP_531714.1 Strain : Rhodopseudomonas palustris BisB18 Genome accession: NC_007925 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1990730 - 1992712 bp Length : 1983 bp Strand : + Note : - DNA sequence : ATGATCGCCGAGGCCGGGCACTATGCGCTGGTGCTGGCGCTCGGGCTGGCGCTGATCCAGGCCAGCGTGCCGGTGCTCGG CGCGCGGCTGCGCGATCCCGCCTTGATGAACGTCGCGCGTTCCGCGGCGCTGGCGCAACTGCTGTTCGTCGGCCTCTCGT TCACCGCGCTGGTGTACCTGTACGTCATCTCGGATTTCTCCGTCGCCAACGTGTTCGAGAATTCGCATTCCGCCAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGCAATCACGAAGGCTCGATGCTGCTGTGGGTGTCGATCCTGGCCTTGTTCGG CGGCCTGGTCGCCGCCTTCGGCAACAACCTGCCGCTGAGCTTGCGCGCCCACGTGCTGGCGGTGCAGGCCTGGATCGCCA CCGCGTTCTATCTGTTCATCCTGATTACTTCCAACCCGTTCCTGCGTCTCGACGACCCGCCGATCGAGGGCCGCGATCTC AATCCGGTGCTGCAGGACATCGGGCTCGCGATCCATCCGCCGATGCTCTATCTCGGCTATGTCGGGTTCTCGATCTCGTT CTCCTTCGCCATCGCCGCCTTGATCGAAGGCCGCGTCGACGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATGG CGTGGATCTTCCTCACCCTCGGCATCGCGATGGGCTCGTATTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGCTGATGCCATGGCTGGCCGGCACCGCGCTGTTGCATTCCGCCGTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCCGGCGTGTTGACCTCGGTGCACGCCTTCGCCACCGATCCGACCCGCGGCGTGTTCATCCTGCTGATCCTGTGCGTG TTCATCGGCGGCAGCCTGTCGCTGTATGCCTCGCGCGCCTCCAGTCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG CGAAGGCGCGCTGGTACTCAACAATCTGTTCCTCACCACCGCCTGCGCCACGGTGTTCATCGGCACGCTGTATCCGCTGG CGCTGGAAGTGCTGACCGGCGACAAGATCTCGGTTGGCGCGCCGTTCTTCAATCTCACCTTCGGGCCGCTGTTCGTGCCG CTGCTGCTGGCGGTGCCGTTCGGCCCCTTGCTGGCGTGGAAACGCGGCGATCTGATCGGCGCGGCGCAGCGGCTGATTGC CGCCGGCGTTGCCGCCTTGATCGCGATCGCGCTGCTGTGGTCCTTCGTGCATGGCGGCAGCACGCTGGCGCCGCTGGCGA TCGGGCTGGCCGTGTTCGTGATCGCCGGAGCCTTGGTCGATCTGGTCGAGCGCATCGGCCTGTTCCGCAATCCGCTCGGC ATCGTGTGGCGCCGCGCGCGAGGCCTGCCGCGCTCGACCTGGGGCACCGCCTTCGCCCATGCCGGTGTCGGCGTGGCGCT GATCGGGATCGTCTGCGAGACCACCTGGAATAGCGAATATATCGGCACCATGAGCGCCGGGCAGAGCGCCAAGCTCGCCG GCTACGAGTTGAAGCTCGACGGCCTGCAGTCGCGGCAGGGACCGAATTTCCGTGAGCTGCTGGCGCAGTTCACCGTCACC GAGGCGGGTCTGCCGATCGGGGTGATGAACCCGTCGAAGCGCGCCTTCGCCGCGCGCGGCTCCTCCACCTCGGAGGCAGC GCTGCTGACCCGCGGCGTCAGCCAGCTCTACGTCTCGCTCGGCGAGCCCACCGCCGACGGCGGCATCGCGGTGCGGATCT ATCACAAGCCGATGGTGCTGTTGATCTGGTTCGGGCCGCTGTTGATGGCGTTCGGCGGGTTGCTGTCGCTTTCGGACCGG CGGCTGCGGGTCGGTGCGCCGAAGCCGGCGCGACAAGCGCGCGGCTTGCAGGCGGCGGAGTGA Protein sequence : MIAEAGHYALVLALGLALIQASVPVLGARLRDPALMNVARSAALAQLLFVGLSFTALVYLYVISDFSVANVFENSHSAKP LLYKITGVWGNHEGSMLLWVSILALFGGLVAAFGNNLPLSLRAHVLAVQAWIATAFYLFILITSNPFLRLDDPPIEGRDL NPVLQDIGLAIHPPMLYLGYVGFSISFSFAIAALIEGRVDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSAVVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILLILCV FIGGSLSLYASRASSLKQGGLFAPISREGALVLNNLFLTTACATVFIGTLYPLALEVLTGDKISVGAPFFNLTFGPLFVP LLLAVPFGPLLAWKRGDLIGAAQRLIAAGVAALIAIALLWSFVHGGSTLAPLAIGLAVFVIAGALVDLVERIGLFRNPLG IVWRRARGLPRSTWGTAFAHAGVGVALIGIVCETTWNSEYIGTMSAGQSAKLAGYELKLDGLQSRQGPNFRELLAQFTVT EAGLPIGVMNPSKRAFAARGSSTSEAALLTRGVSQLYVSLGEPTADGGIAVRIYHKPMVLLIWFGPLLMAFGGLLSLSDR RLRVGAPKPARQARGLQAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-98 | 47 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-83 | 45 |
