Gene Information

Name : LSL_1459 (LSL_1459)
Accession : YP_536346.1
Strain : Lactobacillus salivarius UCC118
Genome accession: NC_007929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1519933 - 1520616 bp
Length : 684 bp
Strand : -
Note : COG1136 [V] ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATTAGGCTAGAAAATATTAACAAATACTACCAACAAGGCGATTCTCAATTTCATGTGTTACATGATATTAATCTAAA
TATCGATGCAGGAGAATTGGTAGCAATTATTGGTGAATCTGGTTCAGGGAAATCTACTTTGATAAATATTATTGGTTTTT
TAGATGATAAGTTTGAGGGGACTTATTATTATAACGATGAACCAATCCATGATTATAATAGAAAAGATTTTTCAAAACTT
CGGAACGAAAATGTAGGGTTTGTTTTTCAAAATTTTAAGTTATTAAGAGACGTTAGTGTGGCAGAAAATGTGGCTTTGCC
ATTACTGTATGCTGGTAAGAAACGTGCGGAGATTAAGGAAAGAGTTAGCGAAGTTTTGAGTAAAGTAGGTCTGGCTGGTT
ATGAAAATAAATTGCCTAAAAATATGTCTGGTGGGCAGCAACAACGTGTTTCGATAGCACGAGCAATAGCTACGAATCCT
AAATTCTTAATTGCTGACGAACCAACTGGGGCTTTGGATACACAAACTAGCCAAGAAATTATGAATTTATTTAAGGAACT
TAATCGAGAAAGTCATACAACTATTATTTTAGTTACACACGATCCCCACGTTGCTGAGCAATGTGAAAGGGTAGTAACAA
TTCTTGATGGTCACATGATAAAAGATGAAAGGAATGAGATATAA

Protein sequence : 
MIRLENINKYYQQGDSQFHVLHDINLNIDAGELVAIIGESGSGKSTLINIIGFLDDKFEGTYYYNDEPIHDYNRKDFSKL
RNENVGFVFQNFKLLRDVSVAENVALPLLYAGKKRAEIKERVSEVLSKVGLAGYENKLPKNMSGGQQQRVSIARAIATNP
KFLIADEPTGALDTQTSQEIMNLFKELNRESHTTIILVTHDPHVAEQCERVVTILDGHMIKDERNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LSL_1459 YP_536346.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-45 46
LSL_1459 YP_536346.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-36 43