|
Name : hlyB (UTI89_C4925) Accession : YP_543859.1 Strain : Escherichia coli UTI89 Genome accession: NC_007946 Putative virulence/resistance : Virulence Product : hemolysin secretion protein HlyB Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 4822828 - 4824951 bp Length : 2124 bp Strand : - Note : - DNA sequence : ATGGATTCTTGTCATAAAATTGATTATGGGTTATACGCCCTGGAGATTTTAGCCCAATACCATAACGTCTCTGTTAACCC GGAAGAAATTAAACATAGATTTGACACAGACGGGACTGGTCTGGGATTAACGTCATGGTTGCTTGCTGCGAAATCTTTAG AACTAAAGGTAAAACAGGTAAAAAAAACAATTGACCGATTAAACTTTATTTCTCTGCCCGCATTAGTCTGGAGAGAGGAT GGACGTCATTTTATTCTGACTAAAGTCAGTAAAGAAGCAAACAGATATCTTATTTTTGATCTGGAGCAGCGAAATCCCCG TGTTCTCGAACAGTCTGAGTTTGAGGCGTTATATCAGGGGCATATTATTCTTATCGCTTCCCGTTCTTCTGTTGCCGGGA AACTGGCGAAATTTGACTTTACCTGGTTTATTCCTGCCATTATAAAATACAGGAGAATATTTATTGAAACCCTTGTTGTG TCTGTTTTTTTACAATTATTTGCATTAATAACCCCCCTTTTTTTTCAGGTGGTTATGGACAAAGTATTAGTGCACAGGGG ATTTTCAACTCTTAATGTTATTACTGTCGCATTATCTGTTGTGGTGGTGTTTGAGATTATACTCAGCGGTTTAAGAACTT ACATTTTTGCACATAGTACAAGTCGGATTGATGTTGAGTTGGGTGCCAAACTCTTCCGGCATTTACTGGCGCTACCGATC TCTTATTTTGAGAGTCGTCGTGTTGGTGATACTGTTGCCAGGGTAAGAGAATTAGACCAGATCCGTAATTTTCTGACAGG ACAGGCATTAACATCTGTTCTGGACTTATTATTTTCATTCATATTTTTTGCGGTAATGTGGTATTACAGTCCAAAGCTTA CTCTGGTGATCTTATTTTCGCTGCCTTGTTATGCTGCATGGTCTGTTTTTATTAGCCCCATTTTGCGACGTCGCCTTGAT GATAAGTTTTCACGGAATGCGGATAATCAATCTTTCCTGGTGGAATCAGTCACGGCGATTAACACTATAAAAGCTATGGC AGTCTCACCTCAGATGACGAACATATGGGACAAACAATTGGCAGGATATGTTGCTGCAGGCTTCAAAGTGACAGTATTAG CAACCATTGGTCAACAAGGAATACAGTTAATACAAAAGACTGTTATGATCATCAACCTGTGGTTGGGAGCACACCTGGTT ATTTCCGGGGATTTAAGTATTGGTCAGTTAATTGCTTTTAATATGCTTGCTGGTCAGATTGTTGCACCGGTTATTCGCCT TGCACAAATCTGGCAGGATTTCCAGCAGGTTGGTATATCAGTTACCCGCCTTGGTGATGTGCTTAACTCTCCAACTGAAA GTTATCATGGGAAACTGGCATTACCGGAAATTAATGGTGATATCACTTTTCGTAATATCCGGTTTCGCTATAAGCCTGAC TCTCCGGTTATTTTAGATAATATCAATCTCAGTATTAAGCAGGGGGAGGTTATTGGTATTGTCGGACGTTCTGGTTCAGG AAAAAGCACATTAACTAAATTAATTCAACGTTTTTATATTCCTGAAAATGGCCAGGTCTTAATTGATGGACATGATCTTG CGTTGGCCGATCCTAACTGGTTACGTCGTCAGGTGGGGGTTGTGTTGCAGGACAATGTGCTGCTTAATCGCAGTATTATT GATAATATCTCACTGGCTAATCCTGGTATGTCCGTCGAAAAAGTTATTTATGCAGCGAAATTAGCAGGCGCTCATGATTT TATTTCTGAATTGCGTGAGGGGTATAACACCATTGTCGGGGAACAGGGGGCAGGATTATCCGGAGGTCAACGTCAACGCA TCGCAATTGCAAGGGCGCTGGTGAACAACCCTAAAATACTTATTTTTGATGAAGCAACCAGTGCTCTGGATTATGAGTCG GAGCATATCATCATGCGCAATATGCACAAAATATGTAAGGGCAGAACGGTTATAATCATTGCTCATCGTCTGTCTACAGT AAAAAATGCAGACCGCATTATTGTCATGGAAAAAGGGAAAATTGTTGAACAGGGTAAACATAAGGAACTGCTTTCTGAAC CGGAAAGTTTATACAGTTACTTATATCAGTTACAGTCAGACTAA Protein sequence : MDSCHKIDYGLYALEILAQYHNVSVNPEEIKHRFDTDGTGLGLTSWLLAAKSLELKVKQVKKTIDRLNFISLPALVWRED GRHFILTKVSKEANRYLIFDLEQRNPRVLEQSEFEALYQGHIILIASRSSVAGKLAKFDFTWFIPAIIKYRRIFIETLVV SVFLQLFALITPLFFQVVMDKVLVHRGFSTLNVITVALSVVVVFEIILSGLRTYIFAHSTSRIDVELGAKLFRHLLALPI SYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILFSLPCYAAWSVFISPILRRRLD DKFSRNADNQSFLVESVTAINTIKAMAVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQKTVMIINLWLGAHLV ISGDLSIGQLIAFNMLAGQIVAPVIRLAQIWQDFQQVGISVTRLGDVLNSPTESYHGKLALPEINGDITFRNIRFRYKPD SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII DNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES EHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 99 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 99 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlyB | YP_543859.1 | hemolysin secretion protein HlyB | VFG1501 | Protein | 0.0 | 99 |
| hlyB | YP_543859.1 | hemolysin secretion protein HlyB | VFG0907 | Protein | 0.0 | 99 |
| hlyB | YP_543859.1 | hemolysin secretion protein HlyB | VFG1557 | Protein | 0.0 | 99 |
| hlyB | YP_543859.1 | hemolysin secretion protein HlyB | VFG0841 | Protein | 0.0 | 73 |
| hlyB | YP_543859.1 | hemolysin secretion protein HlyB | VFG1269 | Protein | 0.0 | 53 |
