Gene Information

Name : hlyA (UTI89_C4926)
Accession : YP_543860.1
Strain : Escherichia coli UTI89
Genome accession: NC_007946
Putative virulence/resistance : Virulence
Product : hemolysin A
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG2931
EC number : 4.6.1.1
Position : 4825022 - 4828096 bp
Length : 3075 bp
Strand : -
Note : -

DNA sequence :
ATGCCAACAATAACCACTGCACAAATTAAAAGCACACTACAGTCTGCAAAGCAATCCGCTGCAAATAAATTGCACTCAGC
AGGACAAAGCACGAAAGATGCATTAAAAAAAGCAGCAGAGCAAACCCGCAATGCGGGAAACAGACTCATTTTACTTATCC
CTAAAGATTATAAAGGACAGGGTTCAAGCCTTAATGACCTTGTCAGGACGGCAGATGAACTGGGAATTGAAGTCCAGTAT
GATGAAAAGAATGGCACGGCGATTACTAAACAGGTATTCGGCACAGCAGAGAAACTCATTGGCCTCACCGAACGGGGAGT
GACTATCTTTGCACCACAATTAGACAAATTACTGCAAAAGTATCAAAAAGCGGGTAATAAATTAGGCGGCAGTGCTGAAA
ATATAGGTGATAACTTAGGAAAGGCAGGCAGTGTACTGTCAACGTTTCAAAATTTTCTGGGTACTGCACTTTCCTCAATG
AAAATAGACGAACTGATAAAGAAACAAAAATCTGGTAGCAATGTCAGTTCTTCTGAACTGGCAAAAGCGAGTATTGAGCT
AATCAACCAACTCGTGGACACAGCTGCCAGCATTAATAATAATGTTAACTCATTTTCTCAACAACTCAATAAGCTGGGAA
GTGTATTATCCAATACAAAGCACCTGAACGGTGTTGGTAATAAGTTACAGAATTTACCTAACCTTGATAATATCGGTGCA
GGGTTAGATACTGTATCGGGTATTTTATCTGCGATTTCAGCAAGCTTCATTCTGAGCAATGCAGATGCAGATACCGGAAC
TAAAGCTGCAGCAGGTGTTGAATTAACAACGAAAGTACTGGGTAATGTTGGAAAAGGTATTTCTCAATATATTATCGCAC
AGCGCGCTGCACAGGGGTTATCTACATCTGCTGCTGCTGCCGGTTTAATTGCTTCTGTAGTGACATTAGCAATTAGTCCC
CTCTCATTCCTGTCCATTGCCGATAAGTTTAAACGTGCAAATAAAATAGAGGAGTATTCACAACGATTCAAAAAACTTGG
ATACGATGGTGACAGTTTACTTGCTGCTTTCCACAAAGAAACAGGAGCTATTGATGCATCATTAACAACGATAAGCACTG
TACTGGCTTCAGTATCTTCAGGTATTAGTGCTGCTGCAACGACATCTCTTGTTGGTGCACCGGTAAGCGCACTGGTAGGT
GCTGTTACGGGGATAATTTCAGGTATCCTTGAGGCTTCAAAGCAGGCAATGTTTGAACATGTTGCCAGTAAAATGGCTGA
TGTTATTGCTGAATGGGAGAAAAAACACGGTAAAAATTACTTTGAAAATGGATATGATGCCCGCCATGCTGCATTTTTAG
AAGATAACTTTAAAATATTATCTCAGTATAATAAAGAGTATTCTGTTGAAAGATCAGTCCTCATTACTCAACAACATTGG
GATATGCTGATAGGTGAGTTAGCTAGTGTCACCAGAAATGGAGACAAGACACTCAGTGGTAAAAGTTATATTGACTATTA
TGAAGAGGGAAAGCGGCTGGAAAGAAGGCCAAAAGAGTTCCAGCAACAAATCTTTGATCCATTAAAAGGAAATATTGACC
TTTCTGACAGCAAATCTTCTACGTTATTGAAATTTGTTACGCCATTGTTAACTCCCGGTGAGGAAATTCGTGAAAGGAGG
CAGTCCGGAAAATATGAATATATTACCGAGTTATTAGTCAAGGGTGTTGATAAATGGACGGTGAAGGGGGTTCAGGACAA
GGGGTCTGTATATGATTACTCTAACCTGATTCAGCATGCATCAGTCGGTAATAACCAGTATCGGGAAATTCGTATTGAGT
CACACCTGGGAGACGGGGATGATAAGGTCTTTTTATCTGCCGGCTCAGCCAATATCTACGCAGGTAAAGGACATGATGTT
GTTTATTATGATAAAACAGACACCGGTTATCTGACCATTGATGGCACAAAAGCAACCGAAGCGGGTAATTACACGGTAAC
ACGTGTACTTGGTGGTGATGTTAAGGTTTTACAGGAAGTTGTGAAGGAGCAGGAGGTTTCAGTCGGAAAAAGAACTGAAA
AAACGCAATATCGGAGTTATGAATTCACTCATATCAATGGTAAAAATTTAACAGAGACAGATAACTTATATTCCGTGGAA
GAACTTATTGGGACCACGCGTGCCGACAAGTTTTTTGGCAGTAAATTTACTGATATCTTCCATGGCGCGGATGGTGATGA
CCATATAGAAGGAAATGATGGGAATGACCGCTTATATGGTGATAAAGGTAATGATACGCTGAGGGGCGGAAACGGGGATG
ACCAGCTCTATGGCGGTGATGGCAATGATAAGTTAATTGGGGGGACAGGTAATAATTACCTTAACGGCGGTGACGGAGAT
GATGAGCTTCAGGTTCAGGGGAATTCTCTTGCTAAAAATGTATTATCCGGTGGAAAAGGTAATGACAAGTTGTACGGCAG
TGAGGGAGCAGACCTGCTTGATGGCGGAGAAGGGAATGATCTTCTGAAAGGTGGATATGGTAATGATATTTATCGTTATC
TTTCAGGATATGGCCATCATATTATTGACGATGAAGGGGGGAAAGACGATAAACTCAGTTTAGCTGATATAGATTTCCGG
GACGTTGCCTTTAAGCGAGAAGGGAATGACCTCATTATGTATAAAGCTGAAGGTAATGTTCTTTCTATTGGCCACAAAAA
TGGTATTACATTTAAAAACTGGTTTGAAAAAGAGTCAGATGATCTCTCTAATCATCAGATAGAGCAGATTTTTGATAAAG
ACGGCAGGGTAATCACACCAGATTCTCTTAAAAAAGCATTTGAATATCAGCAGAGTAATAACAAGGTAAGTTATGTGTAT
GGACATGATGCATCAACTTATGGGAGCCAGGACAATCTTAATCCATTAATTAATGAAATCAGCAAAATCATTTCAGCTGC
AGGTAACTTCGATGTTAAGGAGGAAAGATCTGCCGCTTCTTTATTGCAGTTGTCCGGTAATGCCAGTGATTTTTCATATG
GACGGAACTCAATAACTTTGACAGCATCAGCATAA

Protein sequence :
MPTITTAQIKSTLQSAKQSAANKLHSAGQSTKDALKKAAEQTRNAGNRLILLIPKDYKGQGSSLNDLVRTADELGIEVQY
DEKNGTAITKQVFGTAEKLIGLTERGVTIFAPQLDKLLQKYQKAGNKLGGSAENIGDNLGKAGSVLSTFQNFLGTALSSM
KIDELIKKQKSGSNVSSSELAKASIELINQLVDTAASINNNVNSFSQQLNKLGSVLSNTKHLNGVGNKLQNLPNLDNIGA
GLDTVSGILSAISASFILSNADADTGTKAAAGVELTTKVLGNVGKGISQYIIAQRAAQGLSTSAAAAGLIASVVTLAISP
LSFLSIADKFKRANKIEEYSQRFKKLGYDGDSLLAAFHKETGAIDASLTTISTVLASVSSGISAAATTSLVGAPVSALVG
AVTGIISGILEASKQAMFEHVASKMADVIAEWEKKHGKNYFENGYDARHAAFLEDNFKILSQYNKEYSVERSVLITQQHW
DMLIGELASVTRNGDKTLSGKSYIDYYEEGKRLERRPKEFQQQIFDPLKGNIDLSDSKSSTLLKFVTPLLTPGEEIRERR
QSGKYEYITELLVKGVDKWTVKGVQDKGSVYDYSNLIQHASVGNNQYREIRIESHLGDGDDKVFLSAGSANIYAGKGHDV
VYYDKTDTGYLTIDGTKATEAGNYTVTRVLGGDVKVLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVE
ELIGTTRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLNGGDGD
DELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDEGGKDDKLSLADIDFR
DVAFKREGNDLIMYKAEGNVLSIGHKNGITFKNWFEKESDDLSNHQIEQIFDKDGRVITPDSLKKAFEYQQSNNKVSYVY
GHDASTYGSQDNLNPLINEISKIISAAGNFDVKEERSAASLLQLSGNASDFSYGRNSITLTASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyA NP_755445.1 hemolysin A Virulence PAI I CFT073 Protein 0.0 98
hlyA CAD33759.1 hemolysin A Virulence PAI I 536 Protein 0.0 98
hlyA CAD42039.1 HlyA protein Virulence PAI II 536 Protein 0.0 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyA YP_543860.1 hemolysin A VFG0906 Protein 0.0 98
hlyA YP_543860.1 hemolysin A VFG1500 Protein 0.0 98
hlyA YP_543860.1 hemolysin A VFG1558 Protein 0.0 97
hlyA YP_543860.1 hemolysin A VFG0840 Protein 0.0 63