Gene Information

Name : Bpro_0544 (Bpro_0544)
Accession : YP_547402.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Virulence
Product : periplasmic sensor signal transduction histidine kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2205
EC number : -
Position : 541905 - 543368 bp
Length : 1464 bp
Strand : +
Note : -

DNA sequence :
ATGAGCTTCAGAGGCACCCTCTCGCAACGTCTATCCGTAGTGTTTTCGGTCCTGCTGCTGGCTTGCTGCAGTGCATCGGC
GTGGCTACAGATAAAGGCAAATGGGCGCCATGATCAGGAAGTGACCCAGCGCCTCTCCAACGGCCTTGCAGCACACATCG
CAGACAACGCTGCGCTCGTGGAACGCGACGGACTCAACCCGGAGGCCGTGCACGATCTGTTCGACAAACTGATGGCGGTC
AATCCTAGCGTTGAGGTCTACTTGTTGGATCTGGACGGTCGCATTCAGGCTCAGGCCGCACCGCCTGGGCACTTGAAGCG
TGACCGGGTCGACGTCGCGCCCATCCGACGCCTTCTCGAAGGCACACCCTTGCCGATCGTCGGCGACGATCCGCGAGGTG
ATGGCGTGCAGAAAGTGTTCAGTGCGGCACCCTTGCGCGTCGATGACCGCGATGTCGGCTATGTCTACGTCGTGTTGTTC
GGCGAGGACCGTGATGCGGTGGCTGCCAACGTCGCGGCGAACAGTGTACTCAGGACCACCCTGTGGTCGATGGCTCTCGT
GGCGCTGCTAGGCCTGCTGGCCGGACTGGCGGCCTTTCACCTGATCACCCGGCCGCTGCGCGATCTCACCGGTGCGGTGC
GCAAATTCGAGAAAGACGGCGTGGTGTCGCTGCACGAGGCGGGGCCGGCCCTCGAACGGGCGGGCCGGGGCAGCGACGAA
ATCGCCACACTGGGACAGGCCTTTGCGCAGATGACACAGCGCATCGCGGCGCAGTGGCGCGAACTCACGGCGCAGGACCA
GCAGCGGCGCGAACTGTTTGCCAACATTTCGCACGACCTGCGCACACCGCTCACCTCTCTGCACGGTTACCTCGAAACGC
TGCTCATCAAGGCCGACGCCCTGGACCCCGGCGAACGCCGCCGCTACCTCGAGATCGCGTTGGCGCAAAGCCGTAAGGTC
GCGCGGCTGGCGCAGGAATTGTTCGAGCTGGCGCGTCTGGAGTACGGCGTCGTCAAGCCCGACAAGGAGACTTTCGCCCT
GGCCGACCTGGTGCAGGACGTGTTCCAGAAGTTCGAATTGGCGGCAGAGGCGCGGCACCAACGTCTGGTGCCGGACATTG
CACCAGGCCTTCCCGTCGTTACAGCCGATCTCGGCATGATCGAGCGCGTGCTGACCAACCTGCTGGACAACGCGATCCGC
CACACGCCCGAGGGCGGCGAGATCGTGGTGCAGCTACGACAAGACCGGGAGTCCGTGTGCGTCGAGGTCAGCGACACCGG
ACCGGGCATTCCCGGCGAGTTACAGAAGTCGCTCTTCACCCGACCCGCGTTTTCGTCGGCCGGCGGCCGCAGCGGCGGAC
TCGGACTGGTCATTGTGCAACGCATACTTCAGTTGCATGGCAGCGACATTCGGCTGCTGCAGCGTGCCGAGAAAGGTGCC
GTATTTTTCTTTCAACTCACATGA

Protein sequence :
MSFRGTLSQRLSVVFSVLLLACCSASAWLQIKANGRHDQEVTQRLSNGLAAHIADNAALVERDGLNPEAVHDLFDKLMAV
NPSVEVYLLDLDGRIQAQAAPPGHLKRDRVDVAPIRRLLEGTPLPIVGDDPRGDGVQKVFSAAPLRVDDRDVGYVYVVLF
GEDRDAVAANVAANSVLRTTLWSMALVALLGLLAGLAAFHLITRPLRDLTGAVRKFEKDGVVSLHEAGPALERAGRGSDE
IATLGQAFAQMTQRIAAQWRELTAQDQQRRELFANISHDLRTPLTSLHGYLETLLIKADALDPGERRRYLEIALAQSRKV
ARLAQELFELARLEYGVVKPDKETFALADLVQDVFQKFELAAEARHQRLVPDIAPGLPVVTADLGMIERVLTNLLDNAIR
HTPEGGEIVVQLRQDRESVCVEVSDTGPGIPGELQKSLFTRPAFSSAGGRSGGLGLVIVQRILQLHGSDIRLLQRAEKGA
VFFFQLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-80 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_0544 YP_547402.1 periplasmic sensor signal transduction histidine kinase VFG1701 Protein 1e-80 44